PPGR - Gene Detail

Basic Information

Gene ID	PILA_28272.g View in Genome Browser
Position	scaffold_13036:5114170-5136732 (+) 22562bp
Gene Type	gene
Gene Description (Protein Product)	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Organism	Pinus lambertiana
Also AS	ATCG00500

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

PILA_30329.g Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit

PILA_34534.g Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha

PILA_36285.g of pyruvate dehydrogenase complex

Regulatory gene

PILA_00081.g MYB-CC type transfactor, LHEQLE motif

PILA_00133.g transcription factor

PILA_00523.g isoform X1

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map01100	Metabolic pathways	-
map00640	Propanoate metabolism	-
map00620	Pyruvate metabolism	-
map00195	Photosynthesis	Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
map00061	Fatty acid biosynthesis	-