Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
PILA_29418.g
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Position
scaffold_5217:18442843-18486259 (-)
43416bp
Gene Type
gene
Gene Description (Protein Product)
chloroplast mRNA modification
Organism
Pinus lambertiana
Also AS AT3G20930

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PILA_29601.g protein At3g15000, mitochondrial-like
PILA_32162.g RNA recognition motif
PILA_31088.g Pentatricopeptide repeat-containing protein
Regulatory gene
PILA_00656.g dof zinc finger protein
PILA_00720.g B3 domain-containing protein
PILA_01307.g AP2 ERF and B3 domain-containing transcription

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0005488 binding MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009451 RNA modification BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0016070 RNA metabolic process BP
GO:0016071 mRNA metabolic process BP
GO:0016553 base conversion or substitution editing BP
GO:0016554 cytidine to uridine editing BP
GO:0016556 mRNA modification BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0050896 response to stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:1900865 chloroplast RNA modification BP
GO:1900871 chloroplast mRNA modification BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF