Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
PILA_29985.g
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Position
scaffold_15120:750208-851160 (+)
100952bp
Gene Type
gene
Gene Description (Protein Product)
FMN-dependent dehydrogenase
Organism
Pinus lambertiana
Also AS AT3G14420

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PILA_31741.g Phosphoglycolate
PILA_31869.g -
PILA_35674.g Ubiquitin-2 like Rad60 SUMO-like
Regulatory gene
PILA_00290.g MADS-box transcription factor
PILA_00341.g ethylene-responsive transcription factor
PILA_00656.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003973 (S)-2-hydroxy-acid oxidase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005777 peroxisome CC
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008891 (S)-2-hydroxy-acid oxidase activity MF
GO:0009853 photorespiration BP
GO:0009987 cellular process BP
GO:0010109 regulation of photosynthesis BP
GO:0016032 viral process BP
GO:0016491 oxidoreductase activity MF
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors MF
GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor MF
GO:0019048 modulation by virus of host process BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0035821 modulation of process of another organism BP
GO:0042579 microbody CC
GO:0043094 cellular metabolic compound salvage BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044003 modulation by symbiont of host process BP
GO:0044237 cellular metabolic process BP
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051701 biological process involved in interaction with host BP
GO:0051704 obsolete multi-organism process BP
GO:0051817 obsolete modulation of process of other organism involved in symbiotic interaction BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0065007 biological regulation BP
KEGG Term Name Description
map04146 Peroxisome Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00630 Glyoxylate and dicarboxylate metabolism -