PPGR - Gene Detail

Basic Information

Gene ID	PILA_34492.g View in Genome Browser
Position	scaffold_3275:545500-571825 (+) 26325bp
Gene Type	gene
Gene Description (Protein Product)	Autophagy-related protein C terminal domain
Organism	Pinus lambertiana
Also AS

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

PILA_34690.g Autophagy-related protein

PILA_35017.g required for autophagy

PILA_34560.g Cysteine protease required for autophagy, which is able to cleave the C-terminal part of ATG8 that may be subsequently converted to a smaller form, with a revealed C-terminal glycine. The C-terminal glycine of ATG8 is conjugated to phosphatidylethanolamine by an amide bond. This conjugated form has the capacity for the binding to autophagosomes (By similarity)

Regulatory gene

PILA_00656.g dof zinc finger protein

PILA_00720.g B3 domain-containing protein

PILA_01307.g AP2 ERF and B3 domain-containing transcription

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000045	autophagosome assembly	BP
GO:0002376	immune system process	BP
GO:0006914	autophagy	BP
GO:0006950	response to stress	BP
GO:0006952	defense response	BP
GO:0006955	immune response	BP
GO:0006996	organelle organization	BP
GO:0007033	vacuole organization	BP
GO:0007275	multicellular organism development	BP
GO:0007568	aging	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009617	response to bacterium	BP
GO:0009620	response to fungus	BP
GO:0009814	defense response to other organism	BP
GO:0009816	defense response to bacterium	BP
GO:0009987	cellular process	BP
GO:0010150	leaf senescence	BP
GO:0016043	cellular component organization	BP
GO:0016236	macroautophagy	BP
GO:0022607	cellular component assembly	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0042742	defense response to bacterium	BP
GO:0043207	response to external biotic stimulus	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0045087	innate immune response	BP
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048731	system development	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0050832	defense response to fungus	BP
GO:0050896	response to stimulus	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0061919	process utilizing autophagic mechanism	BP
GO:0070925	organelle assembly	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0090693	plant organ senescence	BP
GO:0098542	defense response to other organism	BP
GO:0099402	plant organ development	BP
GO:1905037	autophagosome organization	BP