PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	PILA_34564.g View in Genome Browser
Position	scaffold_13915:754317-755553 (+) 1236bp
Gene Type	gene
Gene Description (Protein Product)	resolution of recombination intermediates
Organism	Pinus lambertiana
Also AS	AT5G48390

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	PILA_37894.g Component of the post-replicative DNA mismatch repair system (MMR) PILA_38281.g Crossover junction endonuclease MUS81 PILA_36060.g ATP-dependent DNA helicase
Regulatory gene	PILA_00290.g MADS-box transcription factor PILA_00656.g dof zinc finger protein PILA_01372.g dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000280	nuclear division	BP
GO:0000712	resolution of meiotic recombination intermediates	BP
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005694	chromosome	CC
GO:0005737	cytoplasm	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006259	DNA metabolic process	BP
GO:0006310	DNA recombination	BP
GO:0006311	meiotic gene conversion	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006996	organelle organization	BP
GO:0007049	cell cycle	BP
GO:0007059	chromosome segregation	BP
GO:0007127	meiosis I	BP
GO:0007129	homologous chromosome pairing at meiosis	BP
GO:0007131	reciprocal meiotic recombination	BP
GO:0007140	male meiotic nuclear division	BP
GO:0007143	female meiotic nuclear division	BP
GO:0007276	gamete generation	BP
GO:0007292	female gamete generation	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009987	cellular process	BP
GO:0016043	cellular component organization	BP
GO:0019953	sexual reproduction	BP
GO:0022402	cell cycle process	BP
GO:0022412	cellular process involved in reproduction in multicellular organism	BP
GO:0022414	reproductive process	BP
GO:0032501	multicellular organismal process	BP
GO:0032504	multicellular organism reproduction	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0035822	gene conversion	BP
GO:0035825	homologous recombination	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0044703	multi-organism reproductive process	BP
GO:0045132	meiotic chromosome segregation	BP
GO:0045143	homologous chromosome segregation	BP
GO:0046483	heterocycle metabolic process	BP
GO:0048232	male gamete generation	BP
GO:0048285	organelle fission	BP
GO:0048609	multicellular organismal reproductive process	BP
GO:0051276	chromosome organization	BP
GO:0051304	chromosome separation	BP
GO:0051307	meiotic chromosome separation	BP
GO:0051321	meiotic cell cycle	BP
GO:0051704	obsolete multi-organism process	BP
GO:0061982	meiosis I cell cycle process	BP
GO:0070192	chromosome organization involved in meiotic cell cycle	BP
GO:0071139	resolution of recombination intermediates	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0098813	nuclear chromosome segregation	BP
GO:0140013	meiotic nuclear division	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1903046	meiotic cell cycle process	BP