PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	PILA_35106.g View in Genome Browser
Position	scaffold_11538:1222663-1398631 (+) 175968bp
Gene Type	gene
Gene Description (Protein Product)	DNA-binding protein RHL1
Organism	Pinus lambertiana
Also AS	AT1G48380

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	PILA_36629.g - PILA_36308.g Protein LHY-like isoform X1 PILA_38516.g chromatin remodeling
Regulatory gene	PILA_00306.g transcription factor PILA_00355.g transcription factor PILA_00593.g transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000902	cell morphogenesis	BP
GO:0000904	cell morphogenesis involved in differentiation	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005730	nucleolus	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006259	DNA metabolic process	BP
GO:0006260	DNA replication	BP
GO:0006261	DNA-templated DNA replication	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007049	cell cycle	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009888	tissue development	BP
GO:0009987	cellular process	BP
GO:0010015	root morphogenesis	BP
GO:0010053	root epidermal cell differentiation	BP
GO:0010054	trichoblast differentiation	BP
GO:0016043	cellular component organization	BP
GO:0021700	developmental maturation	BP
GO:0022402	cell cycle process	BP
GO:0022622	root system development	BP
GO:0030154	cell differentiation	BP
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032989	cellular component morphogenesis	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0042023	DNA endoreduplication	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0044786	cell cycle DNA replication	BP
GO:0046483	heterocycle metabolic process	BP
GO:0048364	root development	BP
GO:0048468	cell development	BP
GO:0048469	cell maturation	BP
GO:0048731	system development	BP
GO:0048764	trichoblast maturation	BP
GO:0048765	root hair cell differentiation	BP
GO:0048766	root hair initiation	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0070013	intracellular organelle lumen	CC
GO:0071695	anatomical structure maturation	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0090558	plant epidermis development	BP
GO:0090627	plant epidermal cell differentiation	BP
GO:0097159	organic cyclic compound binding	MF
GO:0099402	plant organ development	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901576	organic substance biosynthetic process	BP
GO:1905392	plant organ morphogenesis	BP