Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
PILA_36109.g
View in Genome Browser
Position
scaffold_1221:201779-202669 (+)
890bp
Gene Type
gene
Gene Description (Protein Product)
pre-mRNA-splicing factor ISY1
Organism
Pinus lambertiana
Also AS AT3G18790

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PILA_36277.g Pre-mRNA-splicing factor ATP-dependent RNA helicase
PILA_36556.g WD domain, G-beta repeat
PILA_37834.g ATP-dependent RNA helicase
Regulatory gene
PILA_00290.g MADS-box transcription factor
PILA_00656.g dof zinc finger protein
PILA_01157.g Zinc finger CCCH domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.