Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
PILA_37022.g
View in Genome Browser
Position
scaffold_14048:4179276-4201137 (-)
21861bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the NPH3 family
Organism
Pinus lambertiana
Also AS AT4G31820

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PILA_37234.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PILA_37915.g SNF1-related protein kinase catalytic subunit alpha
PILA_38495.g ADP-ribosylation factor GTPase-activating protein
Regulatory gene
PILA_00027.g DNA binding domain
PILA_00088.g Transcription factor
PILA_00133.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005770 late endosome CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0007275 multicellular organism development BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009908 flower development BP
GO:0009909 regulation of flower development BP
GO:0009911 positive regulation of flower development BP
GO:0009914 hormone transport BP
GO:0009926 auxin polar transport BP
GO:0010154 fruit development BP
GO:0010229 inflorescence development BP
GO:0010540 basipetal auxin transport BP
GO:0010817 regulation of hormone levels BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0022414 reproductive process BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033036 macromolecule localization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045176 apical protein localization BP
GO:0048316 seed development BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048518 positive regulation of biological process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048582 positive regulation of post-embryonic development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048825 cotyledon development BP
GO:0048827 phyllome development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0051094 positive regulation of developmental process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0060918 auxin transport BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071944 cell periphery CC
GO:0090567 reproductive shoot system development BP
GO:0097708 intracellular vesicle CC
GO:0099402 plant organ development BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000241 regulation of reproductive process BP
GO:2000243 positive regulation of reproductive process BP