Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
PILA_37160.g
View in Genome Browser
Position
scaffold_5619:1245223-1245807 (-)
584bp
Gene Type
gene
Gene Description (Protein Product)
protein binding
Organism
Pinus lambertiana
Also AS AT4G34660

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PILA_38310.g ATG8-interacting protein
Regulatory gene
PILA_00081.g MYB-CC type transfactor, LHEQLE motif
PILA_00158.g NAC domain-containing protein
PILA_00193.g Protein CUP-SHAPED COTYLEDON

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000281 mitotic cytokinesis BP
GO:0000910 cytokinesis BP
GO:0000911 cytokinesis by cell plate formation BP
GO:0000919 cell plate assembly BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006897 endocytosis BP
GO:0006898 receptor-mediated endocytosis BP
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0008150 biological_process BP
GO:0009504 cell plate CC
GO:0009832 plant-type cell wall biogenesis BP
GO:0009920 cell plate formation involved in plant-type cell wall biogenesis BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0022402 cell cycle process BP
GO:0022607 cellular component assembly BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032506 cytokinetic process BP
GO:0042546 cell wall biogenesis BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048285 organelle fission BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051301 cell division BP
GO:0061640 cytoskeleton-dependent cytokinesis BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071669 plant-type cell wall organization or biogenesis BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072583 clathrin-dependent endocytosis BP
GO:0097708 intracellular vesicle CC
GO:0098657 import into cell BP
GO:0140014 mitotic nuclear division BP
GO:1902410 mitotic cytokinetic process BP
GO:1903047 mitotic cell cycle process BP
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.