PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	PILA_37229.g View in Genome Browser
Position	scaffold_5047:845584-891233 (+) 45649bp
Gene Type	gene
Gene Description (Protein Product)	Chromatin assembly factor 1 subunit
Organism	Pinus lambertiana
Also AS	AT5G64630

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	PILA_37414.g Chromatin assembly factor 1 subunit PILA_37235.g Pectinesterase PILA_37554.g Chromo domain-containing protein
Regulatory gene	PILA_04526.g GATA transcription factor PILA_06913.g GATA transcription factor PILA_07175.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000724	double-strand break repair via homologous recombination	BP
GO:0000725	recombinational repair	BP
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006259	DNA metabolic process	BP
GO:0006281	DNA repair	BP
GO:0006302	double-strand break repair	BP
GO:0006310	DNA recombination	BP
GO:0006323	chromosome organization	BP
GO:0006325	chromatin organization	BP
GO:0006333	chromatin organization	BP
GO:0006334	nucleosome assembly	BP
GO:0006338	chromatin remodeling	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006974	cellular response to DNA damage stimulus	BP
GO:0006996	organelle organization	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008283	cell population proliferation	BP
GO:0009555	pollen development	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009888	tissue development	BP
GO:0009933	meristem structural organization	BP
GO:0009987	cellular process	BP
GO:0010026	trichome differentiation	BP
GO:0016043	cellular component organization	BP
GO:0022607	cellular component assembly	BP
GO:0030154	cell differentiation	BP
GO:0031497	chromatin organization	BP
GO:0031507	heterochromatin formation	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032991	protein-containing complex	CC
GO:0033186	CAF-1 complex	CC
GO:0033554	cellular response to stress	BP
GO:0034622	protein-containing complex assembly	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034728	nucleosome organization	BP
GO:0042393	histone binding	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0046483	heterocycle metabolic process	BP
GO:0048229	gametophyte development	BP
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048507	meristem development	BP
GO:0048532	anatomical structure arrangement	BP
GO:0048731	system development	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0050896	response to stimulus	BP
GO:0051276	chromosome organization	BP
GO:0051716	cellular response to stimulus	BP
GO:0065003	protein-containing complex assembly	BP
GO:0065004	protein-DNA complex assembly	BP
GO:0070828	heterochromatin organization	BP
GO:0071103	DNA conformation change	BP
GO:0071704	organic substance metabolic process	BP
GO:0071824	protein-DNA complex subunit organization	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0090558	plant epidermis development	BP
GO:0099402	plant organ development	BP
GO:1901360	organic cyclic compound metabolic process	BP