Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt0G07120
View in Genome Browser
Position
tig00297962:161131-162765 (+)
1634bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the ClpA ClpB family
Organism
Pinus tabuliformis
Also AS AT5G50920

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
Pt0G02510 transcription factor
Pt0G13110 ethylene-responsive transcription factor
Pt0G13260 ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004176 ATP-dependent peptidase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006508 proteolysis BP
GO:0006605 protein targeting BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006996 organelle organization BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009528 plastid inner membrane CC
GO:0009532 plastid stroma CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009579 thylakoid CC
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009706 chloroplast inner membrane CC
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009735 response to cytokinin BP
GO:0009889 regulation of biosynthetic process BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010380 regulation of chlorophyll biosynthetic process BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017038 protein import BP
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019866 organelle inner membrane CC
GO:0022607 cellular component assembly BP
GO:0030312 external encapsulating structure CC
GO:0031090 organelle membrane CC
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031897 Tic complex CC
GO:0031967 organelle envelope CC
GO:0031969 chloroplast membrane CC
GO:0031975 envelope CC
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034214 protein hexamerization BP
GO:0034357 photosynthetic membrane CC
GO:0034613 protein localization BP
GO:0042170 plastid membrane CC
GO:0042221 response to chemical BP
GO:0042623 ATP hydrolysis activity MF
GO:0042651 thylakoid membrane CC
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0042886 amide transport BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044238 primary metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045036 protein targeting to chloroplast BP
GO:0045037 protein import into chloroplast stroma BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0046983 protein dimerization activity MF
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051179 localization BP
GO:0051193 obsolete regulation of cofactor metabolic process BP
GO:0051234 establishment of localization BP
GO:0051259 protein complex oligomerization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0055035 plastid thylakoid membrane CC
GO:0055085 transmembrane transport BP
GO:0065002 intracellular protein transmembrane transport BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0070011 peptidase activity MF
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0071705 nitrogen compound transport BP
GO:0071806 protein transmembrane transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072594 establishment of protein localization to organelle BP
GO:0072596 establishment of protein localization to chloroplast BP
GO:0072598 protein localization to chloroplast BP
GO:0090056 regulation of chlorophyll metabolic process BP
GO:0098796 membrane protein complex CC
GO:0140096 catalytic activity, acting on a protein MF
GO:1901401 regulation of tetrapyrrole metabolic process BP
GO:1901463 regulation of tetrapyrrole biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP