Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt2G64360
View in Genome Browser
Position
chr2:1989259591-1989263321 (-)
3730bp
Gene Type
gene
Gene Description (Protein Product)
Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond
Organism
Pinus tabuliformis
Also AS AT4G35790

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pt6G15830 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine
PtXG19700 Acyl-transferase
PtXG19700
Regulatory gene
Pt0G01110 Myb-like DNA-binding domain
Pt0G03060 homeobox-leucine zipper protein
Pt0G06240 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004620 phospholipase activity MF
GO:0004630 phospholipase D activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006629 lipid metabolic process BP
GO:0006644 phospholipid metabolic process BP
GO:0006650 glycerophospholipid metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006950 response to stress BP
GO:0008081 phosphoric diester hydrolase activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008219 cell death BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009506 plasmodesma CC
GO:0009628 response to abiotic stimulus BP
GO:0009787 regulation of abscisic acid-activated signaling pathway BP
GO:0009789 positive regulation of abscisic acid-activated signaling pathway BP
GO:0009966 regulation of signal transduction BP
GO:0009967 positive regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010119 regulation of stomatal movement BP
GO:0010646 regulation of cell communication BP
GO:0010647 positive regulation of cell communication BP
GO:0012501 programmed cell death BP
GO:0016020 membrane CC
GO:0016298 lipase activity MF
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0019637 organophosphate metabolic process BP
GO:0023051 regulation of signaling BP
GO:0023056 positive regulation of signaling BP
GO:0030054 cell junction CC
GO:0042578 phosphoric ester hydrolase activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046473 phosphatidic acid metabolic process BP
GO:0046486 glycerolipid metabolic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0055044 symplast CC
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:0090333 regulation of stomatal closure BP
GO:1901419 regulation of response to alcohol BP
GO:1901421 positive regulation of response to alcohol BP
GO:1905957 regulation of cellular response to alcohol BP
GO:1905959 positive regulation of cellular response to alcohol BP
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00565 Ether lipid metabolism -
map00564 Glycerophospholipid metabolism -