Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt3G11040
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Position
chr3:342468640-342474643 (+)
6003bp
Gene Type
gene
Gene Description (Protein Product)
respiratory burst oxidase homolog protein
Organism
Pinus tabuliformis
Also AS AT5G51060AT1G64060AT5G47910

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pt6G58960 Belongs to the protein kinase superfamily
PtXG32760 Belongs to the protein kinase superfamily
Pt6G26040 Belongs to the protein kinase superfamily
Regulatory gene
Pt0G01110 Myb-like DNA-binding domain
Pt0G06240 Transcription factor
Pt0G27150 transcription repressor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005509 calcium ion binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0006950 response to stress BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009628 response to abiotic stimulus BP
GO:0009791 post-embryonic development BP
GO:0009845 seed germination BP
GO:0016020 membrane CC
GO:0016174 NAD(P)H oxidase H2O2-forming activity MF
GO:0016491 oxidoreductase activity MF
GO:0016651 oxidoreductase activity, acting on NAD(P)H MF
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043621 protein self-association MF
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0048856 anatomical structure development BP
GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor MF
GO:0050896 response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0071944 cell periphery CC
GO:0090351 seedling development BP
GO:0000166 nucleotide binding MF
GO:0005622 intracellular anatomical structure CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005887 plasma membrane CC
GO:0006801 superoxide metabolic process BP
GO:0006952 defense response BP
GO:0006970 response to osmotic stress BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007231 osmosensory signaling pathway BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009611 response to wounding BP
GO:0009617 response to bacterium BP
GO:0009620 response to fungus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009987 cellular process BP
GO:0010941 regulation of cell death BP
GO:0012505 endomembrane system CC
GO:0016021 membrane CC
GO:0016175 superoxide-generating NAD(P)H oxidase activity MF
GO:0020037 heme binding MF
GO:0023052 signaling BP
GO:0030154 cell differentiation BP
GO:0030435 sporulation resulting in formation of a cellular spore BP
GO:0030587 sorocarp development BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0032991 protein-containing complex CC
GO:0033500 carbohydrate homeostasis BP
GO:0033554 cellular response to stress BP
GO:0036094 small molecule binding MF
GO:0042554 superoxide anion generation BP
GO:0042592 homeostatic process BP
GO:0042742 defense response to bacterium BP
GO:0043020 NADPH oxidase complex CC
GO:0043067 regulation of programmed cell death BP
GO:0043069 negative regulation of programmed cell death BP
GO:0043168 anion binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043934 sporulation BP
GO:0044237 cellular metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044459 obsolete plasma membrane part CC
GO:0046906 tetrapyrrole binding MF
GO:0048037 obsolete cofactor binding MF
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048869 cellular developmental process BP
GO:0048878 chemical homeostasis BP
GO:0050660 flavin adenine dinucleotide binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050832 defense response to fungus BP
GO:0051703 biological process involved in intraspecies interaction between organisms BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0060548 negative regulation of cell death BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071470 cellular response to osmotic stress BP
GO:0072593 reactive oxygen species metabolic process BP
GO:0090702 socially cooperative development BP
GO:0097159 organic cyclic compound binding MF
GO:0098542 defense response to other organism BP
GO:0098796 membrane protein complex CC
GO:0098797 plasma membrane protein complex CC
GO:0099120 socially cooperative development BP
GO:0104004 cellular response to environmental stimulus BP
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1902494 catalytic complex CC
GO:1990204 oxidoreductase complex CC
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.