Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt3G47510
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Position
chr3:1481704256-1481710837 (+)
6581bp
Gene Type
gene
Gene Description (Protein Product)
Nucleoside diphosphate kinase
Organism
Pinus tabuliformis
Also AS AT4G23900

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtJG21490 Aspartate glutamate uridylate kinase family protein
Pt5G14460 Belongs to the GDA1 CD39 NTPase family
PtXG29950 Guanylate kinase
Regulatory gene
Pt0G30270 G patch domain-containing protein
Pt0G34770 transcription factor
Pt1G20060 growth-regulating factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004550 nucleoside diphosphate kinase activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005743 mitochondrial inner membrane CC
GO:0005758 mitochondrial intermembrane space CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006165 nucleoside diphosphate phosphorylation BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008270 zinc ion binding MF
GO:0009117 nucleotide metabolic process BP
GO:0009132 nucleoside diphosphate metabolic process BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009536 plastid CC
GO:0009543 chloroplast thylakoid lumen CC
GO:0009579 thylakoid CC
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016776 phosphotransferase activity, phosphate group as acceptor MF
GO:0019205 nucleobase-containing compound kinase activity MF
GO:0019637 organophosphate metabolic process BP
GO:0019866 organelle inner membrane CC
GO:0031090 organelle membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031970 organelle envelope lumen CC
GO:0031974 membrane-enclosed lumen CC
GO:0031975 envelope CC
GO:0031976 plastid thylakoid CC
GO:0031977 thylakoid lumen CC
GO:0031978 plastid thylakoid lumen CC
GO:0031984 organelle subcompartment CC
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0046939 nucleotide phosphorylation BP
GO:0050896 response to stimulus BP
GO:0050897 cobalt ion binding MF
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00240 Pyrimidine metabolism -
map00230 Purine metabolism -