Basic Information
Gene ID
Position
chr3:1744063064-1744064590 (+)
1526bp
Gene Type
gene
Gene Description (Protein Product)
Plasma membrane-associated cation-binding protein
Organism
Also AS AT4G20260

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pt8G56320 Nuclear pore complex protein
Regulatory gene
Pt6G52280 Tesmin/TSO1-like CXC domain
Pt7G39150 tesmin TSO1-like CXC

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000226 microtubule cytoskeleton organization BP
GO:0001101 response to acid chemical BP
GO:0001558 regulation of cell growth BP
GO:0002237 response to molecule of bacterial origin BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005509 calcium ion binding MF
GO:0005515 protein binding MF
GO:0005516 calmodulin binding MF
GO:0005543 phospholipid binding MF
GO:0005546 phosphatidylinositol-4,5-bisphosphate binding MF
GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005881 cytoplasmic microtubule CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006464 protein modification process BP
GO:0006497 protein lipidation BP
GO:0006498 N-terminal protein lipidation BP
GO:0006499 N-terminal protein myristoylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006970 response to osmotic stress BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007154 cell communication BP
GO:0008017 microtubule binding MF
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008289 lipid binding MF
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009267 cellular response to starvation BP
GO:0009409 response to cold BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009506 plasmodesma CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009735 response to cytokinin BP
GO:0009743 response to carbohydrate BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010039 response to iron ion BP
GO:0010118 stomatal movement BP
GO:0010350 cellular response to magnesium starvation BP
GO:0010555 response to mannitol BP
GO:0010638 positive regulation of organelle organization BP
GO:0010639 negative regulation of organelle organization BP
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0016020 membrane CC
GO:0016032 viral process BP
GO:0016043 cellular component organization BP
GO:0018377 protein myristoylation BP
GO:0019058 viral life cycle BP
GO:0019538 protein metabolic process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0030054 cell junction CC
GO:0030308 negative regulation of cell growth BP
GO:0030865 cortical cytoskeleton organization BP
GO:0031110 regulation of microtubule polymerization or depolymerization BP
GO:0031111 negative regulation of microtubule polymerization or depolymerization BP
GO:0031112 positive regulation of microtubule polymerization or depolymerization BP
GO:0031113 regulation of microtubule polymerization BP
GO:0031114 regulation of microtubule depolymerization BP
GO:0031115 negative regulation of microtubule polymerization BP
GO:0031117 positive regulation of microtubule depolymerization BP
GO:0031122 cytoplasmic microtubule organization BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031225 obsolete anchored component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0031333 negative regulation of protein-containing complex assembly BP
GO:0031365 N-terminal protein amino acid modification BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0032026 response to magnesium ion BP
GO:0032271 regulation of protein polymerization BP
GO:0032272 negative regulation of protein polymerization BP
GO:0032886 regulation of microtubule-based process BP
GO:0033043 regulation of organelle organization BP
GO:0033554 cellular response to stress BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0035091 phosphatidylinositol binding MF
GO:0035864 response to potassium ion BP
GO:0035865 cellular response to potassium ion BP
GO:0036211 protein modification process BP
GO:0040008 regulation of growth BP
GO:0042157 lipoprotein metabolic process BP
GO:0042158 lipoprotein biosynthetic process BP
GO:0042221 response to chemical BP
GO:0042594 response to starvation BP
GO:0042742 defense response to bacterium BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043169 cation binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043243 positive regulation of protein-containing complex disassembly BP
GO:0043244 regulation of protein-containing complex disassembly BP
GO:0043254 regulation of protein-containing complex assembly BP
GO:0043325 phosphatidylinositol-3,4-bisphosphate binding MF
GO:0043412 macromolecule modification BP
GO:0043543 protein acylation BP
GO:0043622 cortical microtubule organization BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0044766 obsolete multi-organism transport BP
GO:0045926 negative regulation of growth BP
GO:0046658 obsolete anchored component of plasma membrane CC
GO:0046688 response to copper ion BP
GO:0046794 transport of virus BP
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048638 regulation of developmental growth BP
GO:0048640 negative regulation of developmental growth BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051093 negative regulation of developmental process BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051493 regulation of cytoskeleton organization BP
GO:0051494 negative regulation of cytoskeleton organization BP
GO:0051495 positive regulation of cytoskeleton organization BP
GO:0051510 regulation of unidimensional cell growth BP
GO:0051511 negative regulation of unidimensional cell growth BP
GO:0051592 response to calcium ion BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0055044 symplast CC
GO:0065007 biological regulation BP
GO:0070507 regulation of microtubule cytoskeleton organization BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071216 cellular response to biotic stimulus BP
GO:0071219 cellular response to molecule of bacterial origin BP
GO:0071241 cellular response to inorganic substance BP
GO:0071248 cellular response to metal ion BP
GO:0071280 cellular response to copper ion BP
GO:0071281 cellular response to iron ion BP
GO:0071286 cellular response to magnesium ion BP
GO:0071310 cellular response to organic substance BP
GO:0071322 cellular response to carbohydrate stimulus BP
GO:0071325 cellular response to mannitol stimulus BP
GO:0071470 cellular response to osmotic stress BP
GO:0071472 cellular response to salt stress BP
GO:0071496 cellular response to external stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072708 response to sorbitol BP
GO:0072709 cellular response to sorbitol BP
GO:0075733 intracellular transport of virus BP
GO:0080025 phosphatidylinositol-3,5-bisphosphate binding MF
GO:0090332 stomatal closure BP
GO:0097435 supramolecular fiber organization BP
GO:0098542 defense response to other organism BP
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0104004 cellular response to environmental stimulus BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1901879 regulation of protein depolymerization BP
GO:1901881 positive regulation of protein depolymerization BP
GO:1901981 phosphatidylinositol phosphate binding MF
GO:1902579 obsolete multi-organism localization BP
GO:1902903 regulation of supramolecular fiber organization BP
GO:1902904 negative regulation of supramolecular fiber organization BP
GO:1902905 positive regulation of supramolecular fiber organization BP
GO:1902936 phosphatidylinositol bisphosphate binding MF