Basic Information
Gene ID
Position
chr3:1787309830-1787311434 (-)
1604bp
Gene Type
gene
Gene Description (Protein Product)
Plasma membrane-associated cation-binding protein
Organism
Also AS AT4G20260

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pt9G38830 Rae1-like protein
Pt8G56320 Nuclear pore complex protein
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G03060 homeobox-leucine zipper protein
Pt0G07980 dof zinc finger protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000226 microtubule cytoskeleton organization BP
GO:0001101 response to acid chemical BP
GO:0001558 regulation of cell growth BP
GO:0002237 response to molecule of bacterial origin BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005509 calcium ion binding MF
GO:0005515 protein binding MF
GO:0005516 calmodulin binding MF
GO:0005543 phospholipid binding MF
GO:0005546 phosphatidylinositol-4,5-bisphosphate binding MF
GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005881 cytoplasmic microtubule CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006464 protein modification process BP
GO:0006497 protein lipidation BP
GO:0006498 N-terminal protein lipidation BP
GO:0006499 N-terminal protein myristoylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006970 response to osmotic stress BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007154 cell communication BP
GO:0008017 microtubule binding MF
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008289 lipid binding MF
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009267 cellular response to starvation BP
GO:0009409 response to cold BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009506 plasmodesma CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009735 response to cytokinin BP
GO:0009743 response to carbohydrate BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010039 response to iron ion BP
GO:0010118 stomatal movement BP
GO:0010350 cellular response to magnesium starvation BP
GO:0010555 response to mannitol BP
GO:0010638 positive regulation of organelle organization BP
GO:0010639 negative regulation of organelle organization BP
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0016020 membrane CC
GO:0016032 viral process BP
GO:0016043 cellular component organization BP
GO:0018377 protein myristoylation BP
GO:0019058 viral life cycle BP
GO:0019538 protein metabolic process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0030054 cell junction CC
GO:0030308 negative regulation of cell growth BP
GO:0030865 cortical cytoskeleton organization BP
GO:0031110 regulation of microtubule polymerization or depolymerization BP
GO:0031111 negative regulation of microtubule polymerization or depolymerization BP
GO:0031112 positive regulation of microtubule polymerization or depolymerization BP
GO:0031113 regulation of microtubule polymerization BP
GO:0031114 regulation of microtubule depolymerization BP
GO:0031115 negative regulation of microtubule polymerization BP
GO:0031117 positive regulation of microtubule depolymerization BP
GO:0031122 cytoplasmic microtubule organization BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031225 obsolete anchored component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0031333 negative regulation of protein-containing complex assembly BP
GO:0031365 N-terminal protein amino acid modification BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0032026 response to magnesium ion BP
GO:0032271 regulation of protein polymerization BP
GO:0032272 negative regulation of protein polymerization BP
GO:0032886 regulation of microtubule-based process BP
GO:0033043 regulation of organelle organization BP
GO:0033554 cellular response to stress BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0035091 phosphatidylinositol binding MF
GO:0035864 response to potassium ion BP
GO:0035865 cellular response to potassium ion BP
GO:0036211 protein modification process BP
GO:0040008 regulation of growth BP
GO:0042157 lipoprotein metabolic process BP
GO:0042158 lipoprotein biosynthetic process BP
GO:0042221 response to chemical BP
GO:0042594 response to starvation BP
GO:0042742 defense response to bacterium BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043169 cation binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043243 positive regulation of protein-containing complex disassembly BP
GO:0043244 regulation of protein-containing complex disassembly BP
GO:0043254 regulation of protein-containing complex assembly BP
GO:0043325 phosphatidylinositol-3,4-bisphosphate binding MF
GO:0043412 macromolecule modification BP
GO:0043543 protein acylation BP
GO:0043622 cortical microtubule organization BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0044766 obsolete multi-organism transport BP
GO:0045926 negative regulation of growth BP
GO:0046658 obsolete anchored component of plasma membrane CC
GO:0046688 response to copper ion BP
GO:0046794 transport of virus BP
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048638 regulation of developmental growth BP
GO:0048640 negative regulation of developmental growth BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051093 negative regulation of developmental process BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051493 regulation of cytoskeleton organization BP
GO:0051494 negative regulation of cytoskeleton organization BP
GO:0051495 positive regulation of cytoskeleton organization BP
GO:0051510 regulation of unidimensional cell growth BP
GO:0051511 negative regulation of unidimensional cell growth BP
GO:0051592 response to calcium ion BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0055044 symplast CC
GO:0065007 biological regulation BP
GO:0070507 regulation of microtubule cytoskeleton organization BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071216 cellular response to biotic stimulus BP
GO:0071219 cellular response to molecule of bacterial origin BP
GO:0071241 cellular response to inorganic substance BP
GO:0071248 cellular response to metal ion BP
GO:0071280 cellular response to copper ion BP
GO:0071281 cellular response to iron ion BP
GO:0071286 cellular response to magnesium ion BP
GO:0071310 cellular response to organic substance BP
GO:0071322 cellular response to carbohydrate stimulus BP
GO:0071325 cellular response to mannitol stimulus BP
GO:0071470 cellular response to osmotic stress BP
GO:0071472 cellular response to salt stress BP
GO:0071496 cellular response to external stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072708 response to sorbitol BP
GO:0072709 cellular response to sorbitol BP
GO:0075733 intracellular transport of virus BP
GO:0080025 phosphatidylinositol-3,5-bisphosphate binding MF
GO:0090332 stomatal closure BP
GO:0097435 supramolecular fiber organization BP
GO:0098542 defense response to other organism BP
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0104004 cellular response to environmental stimulus BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1901879 regulation of protein depolymerization BP
GO:1901881 positive regulation of protein depolymerization BP
GO:1901981 phosphatidylinositol phosphate binding MF
GO:1902579 obsolete multi-organism localization BP
GO:1902903 regulation of supramolecular fiber organization BP
GO:1902904 negative regulation of supramolecular fiber organization BP
GO:1902905 positive regulation of supramolecular fiber organization BP
GO:1902936 phosphatidylinositol bisphosphate binding MF