Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt5G25260
View in Genome Browser
Position
chr5:852195156-852197129 (+)
1973bp
Gene Type
gene
Gene Description (Protein Product)
Structural maintenance of chromosomes protein
Organism
Pinus tabuliformis
Also AS AT3G54670

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG10820 Sister chromatid cohesion 1 protein
PtQG23650 separase
PtQG19060 Protein CHROMOSOME TRANSMISSION FIDELITY
Regulatory gene
Pt0G00460 Transcription factor
Pt0G10980 Transcription factor
Pt0G14730 transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000793 condensed chromosome CC
GO:0000819 sister chromatid segregation BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005694 chromosome CC
GO:0005737 cytoplasm CC
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007059 chromosome segregation BP
GO:0007062 sister chromatid cohesion BP
GO:0008150 biological_process BP
GO:0008278 cohesin complex CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0022402 cell cycle process BP
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0051276 chromosome organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0098813 nuclear chromosome segregation BP