Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt5G44320
View in Genome Browser
Position
chr5:1548698801-1549015820 (-)
317019bp
Gene Type
gene
Gene Description (Protein Product)
GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis
Organism
Pinus tabuliformis
Also AS AT5G05000

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtQG19540 Calcium-dependent protein kinase
Pt5G54220 Calcium-dependent protein kinase
Pt9G18850 calcium-dependent protein kinase
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein
Pt1G66310 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0001882 nucleoside binding MF
GO:0001883 purine nucleoside binding MF
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003924 GTPase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005525 GTP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006605 protein targeting BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009527 plastid outer membrane CC
GO:0009536 plastid CC
GO:0009707 chloroplast outer membrane CC
GO:0009941 chloroplast envelope CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0017076 purine nucleotide binding MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019001 guanyl nucleotide binding MF
GO:0019750 chloroplast localization BP
GO:0019867 outer membrane CC
GO:0031090 organelle membrane CC
GO:0031967 organelle envelope CC
GO:0031968 organelle outer membrane CC
GO:0031969 chloroplast membrane CC
GO:0031975 envelope CC
GO:0032549 ribonucleoside binding MF
GO:0032550 purine ribonucleoside binding MF
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032561 guanyl ribonucleotide binding MF
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034613 protein localization BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0042170 plastid membrane CC
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0042886 amide transport BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045036 protein targeting to chloroplast BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0046983 protein dimerization activity MF
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051644 plastid localization BP
GO:0051649 establishment of localization in cell BP
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072596 establishment of protein localization to chloroplast BP
GO:0072598 protein localization to chloroplast BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF