Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt5G49800
View in Genome Browser
Position
chr5:1699500817-1699627318 (-)
126501bp
Gene Type
gene
Gene Description (Protein Product)
Phytol kinase
"phytol kinase 2
Organism
Pinus tabuliformis
Also AS AT5G58560

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtQG29430 Male sterility protein
Pt8G58710 Transmembrane protein 208 homolog
Pt6G01270 UDP-galactose UDP-glucose transporter
Regulatory gene
Pt0G00840 WRKY Transcription Factor
Pt0G34770 transcription factor
Pt1G27320 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0001101 response to acid chemical BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006066 alcohol metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006714 sesquiterpenoid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009791 post-embryonic development BP
GO:0009908 flower development BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0016093 polyprenol metabolic process BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016487 farnesol metabolic process BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0016999 antibiotic metabolic process BP
GO:0017144 xenobiotic metabolic process BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033993 response to lipid BP
GO:0034308 primary alcohol metabolic process BP
GO:0042221 response to chemical BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048438 floral whorl development BP
GO:0048440 carpel development BP
GO:0048467 gynoecium development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050896 response to stimulus BP
GO:0052668 CTP:farnesol kinase activity MF
GO:0052669 CTP:farnesol kinase activity MF
GO:0052670 geraniol kinase activity MF
GO:0052671 geranylgeraniol kinase activity MF
GO:0052673 prenol kinase activity MF
GO:0061458 reproductive system development BP
GO:0071704 organic substance metabolic process BP
GO:0090567 reproductive shoot system development BP
GO:0097305 response to alcohol BP
GO:0099402 plant organ development BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map00900 Terpenoid backbone biosynthesis Terpenoids, also known as isoprenoids, are a large class of natural products consisting of isoprene (C5) units. There are two biosynthetic pathways, the mevalonate pathway [MD:M00095] and the non-mevalonate pathway or the MEP/DOXP pathway [MD:M00096], for the terpenoid building blocks: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). The action of prenyltransferases then generates higher-order building blocks: geranyl diphosphate (GPP), farsenyl diphosphate (FPP), and geranylgeranyl diphosphate (GGPP), which are the precursors of monoterpenoids (C10), sesquiterpenoids (C15), and diterpenoids (C20), respectively. Condensation of these building blocks gives rise to the precursors of sterols (C30) and carotenoids (C40). The MEP/DOXP pathway is absent in higher animals and fungi, but in green plants the MEP/DOXP and mevalonate pathways co-exist in separate cellular compartments. The MEP/DOXP pathway, operating in the plastids, is responsible for the formation of essential oil monoterpenes and linalyl acetate, some sesquiterpenes, diterpenes, and carotenoids and phytol. The mevalonate pathway, operating in the cytosol, gives rise to triterpenes, sterols, and most sesquiterpenes.