PPGR - Gene Detail

Basic Information

Gene ID	Pt6G31270 View in Genome Browser
Position	chr6:962885386-962935735 (-) 50349bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the complex I 75 kDa subunit family
Organism	Pinus tabuliformis
Also AS	AT5G37510

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Pt8G03330 Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone

Pt8G62390 NADH dehydrogenase ubiquinone iron-sulfur protein 4, mitochondrial

Pt8G62390 NADH dehydrogenase ubiquinone iron-sulfur protein 4

Regulatory gene

Pt0G01630 dof zinc finger protein

Pt0G07980 dof zinc finger protein

Pt0G30790 Myb family transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0003954	NADH dehydrogenase activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005740	mitochondrial envelope	CC
GO:0005743	mitochondrial inner membrane	CC
GO:0005746	mitochondrial respirasome	CC
GO:0005747	mitochondrial respiratory chain complex I	CC
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0008137	NADH dehydrogenase (ubiquinone) activity	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009853	photorespiration	BP
GO:0009987	cellular process	BP
GO:0015980	energy derivation by oxidation of organic compounds	BP
GO:0016020	membrane	CC
GO:0016491	oxidoreductase activity	MF
GO:0016651	oxidoreductase activity, acting on NAD(P)H	MF
GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	MF
GO:0019866	organelle inner membrane	CC
GO:0030964	NADH dehydrogenase complex	CC
GO:0031090	organelle membrane	CC
GO:0031966	mitochondrial membrane	CC
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0032991	protein-containing complex	CC
GO:0043094	cellular metabolic compound salvage	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044429	obsolete mitochondrial part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044455	obsolete mitochondrial membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0045271	respiratory chain complex I	CC
GO:0045333	cellular respiration	BP
GO:0048037	obsolete cofactor binding	MF
GO:0050136	NADH dehydrogenase (quinone) activity	MF
GO:0050896	response to stimulus	BP
GO:0051536	iron-sulfur cluster binding	MF
GO:0051540	metal cluster binding	MF
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070469	respirasome	CC
GO:0098796	membrane protein complex	CC
GO:0098798	mitochondrial protein-containing complex	CC
GO:0098800	inner mitochondrial membrane protein complex	CC
GO:0098803	respiratory chain complex	CC
GO:1902494	catalytic complex	CC
GO:1990204	oxidoreductase complex	CC

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00190	Oxidative phosphorylation	-