Basic Information
Gene ID
Position
chr6:1409393807-1409886019 (-)
492212bp
Gene Type
gene
Gene Description (Protein Product)
serine threonine-protein kinase
Organism
Also AS AT1G50030

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtQG05140 serine threonine-protein kinase
Pt9G04210 serine threonine-protein kinase
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G02510 transcription factor
Pt0G07980 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006281 DNA repair BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0033554 cellular response to stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:0000003 reproduction BP
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0001558 regulation of cell growth BP
GO:0002682 regulation of immune system process BP
GO:0002683 negative regulation of immune system process BP
GO:0002697 regulation of immune effector process BP
GO:0002698 negative regulation of immune effector process BP
GO:0002831 regulation of response to biotic stimulus BP
GO:0002832 negative regulation of response to biotic stimulus BP
GO:0003006 developmental process involved in reproduction BP
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0004672 protein kinase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005737 cytoplasm CC
GO:0005844 polysome CC
GO:0006351 DNA-templated transcription BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006464 protein modification process BP
GO:0006468 protein phosphorylation BP
GO:0006629 lipid metabolic process BP
GO:0006644 phospholipid metabolic process BP
GO:0006650 glycerophospholipid metabolic process BP
GO:0006661 phosphatidylinositol biosynthetic process BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007275 multicellular organism development BP
GO:0008610 lipid biosynthetic process BP
GO:0008654 phospholipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009303 rRNA transcription BP
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009607 response to biotic stimulus BP
GO:0009615 response to virus BP
GO:0009628 response to abiotic stimulus BP
GO:0009629 response to gravity BP
GO:0009630 gravitropism BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009743 response to carbohydrate BP
GO:0009744 response to sucrose BP
GO:0009745 sucrose mediated signaling BP
GO:0009756 carbohydrate mediated signaling BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009895 negative regulation of catabolic process BP
GO:0009966 regulation of signal transduction BP
GO:0009967 positive regulation of signal transduction BP
GO:0010033 response to organic substance BP
GO:0010115 regulation of abscisic acid biosynthetic process BP
GO:0010116 positive regulation of abscisic acid biosynthetic process BP
GO:0010154 fruit development BP
GO:0010182 sugar mediated signaling pathway BP
GO:0010243 response to organonitrogen compound BP
GO:0010467 gene expression BP
GO:0010468 regulation of gene expression BP
GO:0010506 regulation of autophagy BP
GO:0010507 negative regulation of autophagy BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0010646 regulation of cell communication BP
GO:0010647 positive regulation of cell communication BP
GO:0010928 regulation of auxin mediated signaling pathway BP
GO:0010929 positive regulation of auxin mediated signaling pathway BP
GO:0014070 response to organic cyclic compound BP
GO:0016070 RNA metabolic process BP
GO:0016072 rRNA metabolic process BP
GO:0016303 1-phosphatidylinositol-3-kinase activity MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019216 regulation of lipid metabolic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019538 protein metabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019747 regulation of isoprenoid metabolic process BP
GO:0022414 reproductive process BP
GO:0023051 regulation of signaling BP
GO:0023052 signaling BP
GO:0023056 positive regulation of signaling BP
GO:0030258 lipid modification BP
GO:0030307 positive regulation of cell growth BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0031329 regulation of cellular catabolic process BP
GO:0031330 negative regulation of cellular catabolic process BP
GO:0031347 regulation of defense response BP
GO:0031348 negative regulation of defense response BP
GO:0032101 regulation of response to external stimulus BP
GO:0032102 negative regulation of response to external stimulus BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032774 RNA biosynthetic process BP
GO:0032991 protein-containing complex CC
GO:0034285 response to disaccharide BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0034660 ncRNA metabolic process BP
GO:0035004 phosphatidylinositol 3-kinase activity MF
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process BP
GO:0036211 protein modification process BP
GO:0040008 regulation of growth BP
GO:0040019 positive regulation of embryonic development BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042802 identical protein binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043412 macromolecule modification BP
GO:0043455 regulation of secondary metabolic process BP
GO:0043621 protein self-association MF
GO:0043900 obsolete regulation of multi-organism process BP
GO:0043901 obsolete negative regulation of multi-organism process BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044089 positive regulation of cellular component biogenesis BP
GO:0044212 transcription cis-regulatory region binding MF
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0045017 glycerolipid biosynthetic process BP
GO:0045472 response to ether BP
GO:0045828 positive regulation of isoprenoid metabolic process BP
GO:0045834 positive regulation of lipid metabolic process BP
GO:0045893 positive regulation of DNA-templated transcription BP
GO:0045927 positive regulation of growth BP
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0045995 regulation of embryonic development BP
GO:0046474 glycerophospholipid biosynthetic process BP
GO:0046486 glycerolipid metabolic process BP
GO:0046488 phosphatidylinositol metabolic process BP
GO:0046677 response to antibiotic BP
GO:0046834 lipid phosphorylation BP
GO:0046854 phosphatidylinositol phosphate biosynthetic process BP
GO:0046889 positive regulation of lipid biosynthetic process BP
GO:0046890 regulation of lipid biosynthetic process BP
GO:0048316 seed development BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050687 negative regulation of defense response to virus BP
GO:0050688 regulation of defense response to virus BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0051094 positive regulation of developmental process BP
GO:0051128 regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051254 positive regulation of RNA metabolic process BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0052742 phosphatidylinositol kinase activity MF
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0062013 positive regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071310 cellular response to organic substance BP
GO:0071322 cellular response to carbohydrate stimulus BP
GO:0071324 cellular response to disaccharide stimulus BP
GO:0071329 cellular response to sucrose stimulus BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0090069 regulation of ribosome biogenesis BP
GO:0090070 positive regulation of ribosome biogenesis BP
GO:0090407 organophosphate biosynthetic process BP
GO:0097159 organic cyclic compound binding MF
GO:0097305 response to alcohol BP
GO:0097327 response to antineoplastic agent BP
GO:0097659 nucleic acid-templated transcription BP
GO:0098781 ncRNA transcription BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1900457 regulation of brassinosteroid mediated signaling pathway BP
GO:1900459 positive regulation of brassinosteroid mediated signaling pathway BP
GO:1901355 response to rapamycin BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901654 response to ketone BP
GO:1901698 response to nitrogen compound BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1902659 regulation of glucose mediated signaling pathway BP
GO:1902661 positive regulation of glucose mediated signaling pathway BP
GO:1902680 positive regulation of RNA biosynthetic process BP
GO:1902930 regulation of alcohol biosynthetic process BP
GO:1902932 positive regulation of alcohol biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903508 positive regulation of nucleic acid-templated transcription BP
GO:1990904 ribonucleoprotein complex CC
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000232 regulation of rRNA processing BP
GO:2000234 positive regulation of rRNA processing BP
GO:2001141 regulation of RNA biosynthetic process BP