Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt6G47510
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Position
chr6:1568915011-1568922263 (+)
7252bp
Gene Type
gene
Gene Description (Protein Product)
May be involved in modulation of pathogen defense and leaf cell death
Organism
Pinus tabuliformis
Also AS AT1G61560

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pt8G55340 GDP-mannose transporter
PtXG22250 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
PtXG22250 Ubiquitin family
Regulatory gene
Pt0G00460 Transcription factor
Pt0G01110 Myb-like DNA-binding domain
Pt0G01630 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005886 plasma membrane CC
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0008150 biological_process BP
GO:0009856 pollination BP
GO:0010483 pollen tube reception BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0044706 multi-multicellular organism process BP
GO:0050896 response to stimulus BP
GO:0051703 biological process involved in intraspecies interaction between organisms BP
GO:0051704 obsolete multi-organism process BP
GO:0071944 cell periphery CC