Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt6G56360
View in Genome Browser
Position
chr6:1850648379-1850650247 (+)
1868bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the peptidase A1 family
Organism
Pinus tabuliformis
Also AS AT5G36260

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pt8G41800 Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor
Pt9G08030 Guanylylate cyclase
PtXG05320 G patch domain-containing protein
Regulatory gene
Pt0G02880 -
Pt0G30220 Ocs element-binding factor
Pt0G38930 Ocs element-binding factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004175 endopeptidase activity MF
GO:0004190 aspartic-type endopeptidase activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0016020 membrane CC
GO:0016787 hydrolase activity MF
GO:0019538 protein metabolic process BP
GO:0030163 protein catabolic process BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031225 obsolete anchored component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0043170 macromolecule metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046658 obsolete anchored component of plasma membrane CC
GO:0070001 aspartic-type peptidase activity MF
GO:0070011 peptidase activity MF
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP