Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt7G37870
View in Genome Browser
Position
chr7:1284506707-1284546309 (-)
39602bp
Gene Type
gene
Gene Description (Protein Product)
Ras-related protein
Organism
Pinus tabuliformis
Also AS AT5G65270

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pt9G25990 Belongs to the PI3 PI4-kinase family
Pt8G10000 Belongs to the PI3 PI4-kinase family
Pt8G55400 Belongs to the PI3 PI4-kinase family
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G03060 homeobox-leucine zipper protein
Pt0G07980 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000139 Golgi membrane CC
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005769 early endosome CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0010008 endosome membrane CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0019899 enzyme binding MF
GO:0019900 kinase binding MF
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031901 early endosome membrane CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032456 endocytic recycling BP
GO:0032588 trans-Golgi network membrane CC
GO:0035618 root hair CC
GO:0035619 root hair tip CC
GO:0042546 cell wall biogenesis BP
GO:0042995 cell projection CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098805 membrane CC
GO:0120025 plasma membrane bounded cell projection CC
GO:0120038 obsolete plasma membrane bounded cell projection part CC
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.