Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt7G46250
View in Genome Browser
Position
chr7:1555888070-1555901579 (+)
13509bp
Gene Type
gene
Gene Description (Protein Product)
homeobox-leucine zipper protein
belongs to the protein kinase superfamily
Organism
Pinus tabuliformis
Also AS AT3G61150AT3G45240

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtJG08800 SNF1-related protein kinase catalytic subunit alpha
PtJG08790 SNF1-related protein kinase catalytic subunit alpha
Pt8G34180 SNF1-related protein kinase catalytic subunit alpha
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein
Pt0G20740 (No apical meristem) protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009664 plant-type cell wall organization BP
GO:0009791 post-embryonic development BP
GO:0009827 plant-type cell wall modification BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009908 flower development BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010053 root epidermal cell differentiation BP
GO:0010054 trichoblast differentiation BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0016043 cellular component organization BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0021700 developmental maturation BP
GO:0022414 reproductive process BP
GO:0022622 root system development BP
GO:0030154 cell differentiation BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0042335 cuticle development BP
GO:0042545 cell wall modification BP
GO:0043473 pigmentation BP
GO:0043476 pigment accumulation BP
GO:0043478 pigment accumulation in response to UV light BP
GO:0043479 pigment accumulation in tissues in response to UV light BP
GO:0043480 pigment accumulation in tissues BP
GO:0043481 anthocyanin accumulation in tissues in response to UV light BP
GO:0045229 external encapsulating structure organization BP
GO:0045595 regulation of cell differentiation BP
GO:0045596 negative regulation of cell differentiation BP
GO:0048364 root development BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048468 cell development BP
GO:0048469 cell maturation BP
GO:0048497 maintenance of floral organ identity BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048764 trichoblast maturation BP
GO:0048765 root hair cell differentiation BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051093 negative regulation of developmental process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071669 plant-type cell wall organization or biogenesis BP
GO:0071695 anatomical structure maturation BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090558 plant epidermis development BP
GO:0090567 reproductive shoot system development BP
GO:0090627 plant epidermal cell differentiation BP
GO:0090700 maintenance of plant organ identity BP
GO:0099402 plant organ development BP
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905392 plant organ morphogenesis BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP
GO:0003824 catalytic activity MF
GO:0004672 protein kinase activity MF
GO:0004674 protein serine/threonine kinase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0006464 protein modification process BP
GO:0006468 protein phosphorylation BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008152 metabolic process BP
GO:0009607 response to biotic stimulus BP
GO:0009615 response to virus BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0018105 peptidyl-serine phosphorylation BP
GO:0018107 peptidyl-threonine phosphorylation BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018209 peptidyl-serine modification BP
GO:0018210 peptidyl-threonine modification BP
GO:0019538 protein metabolic process BP
GO:0023052 signaling BP
GO:0030587 sorocarp development BP
GO:0031156 regulation of sorocarp development BP
GO:0035556 intracellular signal transduction BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043412 macromolecule modification BP
GO:0043900 obsolete regulation of multi-organism process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044464 obsolete cell part CC
GO:0046777 protein autophosphorylation BP
GO:0051703 biological process involved in intraspecies interaction between organisms BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0090702 socially cooperative development BP
GO:0099120 socially cooperative development BP
GO:0099134 chimeric sorocarp development BP
GO:0099135 chimeric colonial development BP
GO:0099136 chimeric non-reproductive fruiting body development BP
GO:0099139 cheating during chimeric sorocarp development BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901261 regulation of sorocarp spore cell differentiation BP
GO:1901564 organonitrogen compound metabolic process BP
GO:2000241 regulation of reproductive process BP