Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt8G56360
View in Genome Browser
Position
chr8:1842309625-1842373021 (-)
63396bp
Gene Type
gene
Gene Description (Protein Product)
COP9 signalosome complex subunit
Organism
Pinus tabuliformis
Also AS AT1G71230AT1G22920

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG01790 COP9 signalosome complex subunit
PtJG43430 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PtJG48700 Guanine nucleotide-binding protein alpha-1
Regulatory gene
Pt0G00460 Transcription factor
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000338 protein deneddylation BP
GO:0003002 regionalization BP
GO:0003006 developmental process involved in reproduction BP
GO:0006109 regulation of carbohydrate metabolic process BP
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009791 post-embryonic development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009896 positive regulation of catabolic process BP
GO:0009908 flower development BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010093 specification of floral organ identity BP
GO:0010099 regulation of photomorphogenesis BP
GO:0010100 negative regulation of photomorphogenesis BP
GO:0010387 COP9 signalosome assembly BP
GO:0010389 regulation of G2/M transition of mitotic cell cycle BP
GO:0010564 regulation of cell cycle process BP
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010971 positive regulation of G2/M transition of mitotic cell cycle BP
GO:0016043 cellular component organization BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0030656 regulation of vitamin metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031347 regulation of defense response BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034622 protein-containing complex assembly BP
GO:0036211 protein modification process BP
GO:0042176 regulation of protein catabolic process BP
GO:0042221 response to chemical BP
GO:0043170 macromolecule metabolic process BP
GO:0043255 regulation of carbohydrate biosynthetic process BP
GO:0043412 macromolecule modification BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0045732 positive regulation of protein catabolic process BP
GO:0045787 positive regulation of cell cycle BP
GO:0045931 positive regulation of mitotic cell cycle BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048444 floral organ morphogenesis BP
GO:0048449 floral organ formation BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048581 negative regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048608 reproductive structure development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051093 negative regulation of developmental process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051193 obsolete regulation of cofactor metabolic process BP
GO:0051196 obsolete regulation of coenzyme metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051726 regulation of cell cycle BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0070646 protein modification by small protein removal BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0090068 positive regulation of cell cycle process BP
GO:0090567 reproductive shoot system development BP
GO:0090696 post-embryonic plant organ development BP
GO:0090697 post-embryonic plant organ morphogenesis BP
GO:0090698 post-embryonic plant morphogenesis BP
GO:0090701 specification of plant organ identity BP
GO:0099402 plant organ development BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901987 regulation of cell cycle phase transition BP
GO:1901989 positive regulation of cell cycle phase transition BP
GO:1901990 regulation of mitotic cell cycle phase transition BP
GO:1901992 positive regulation of mitotic cell cycle phase transition BP
GO:1902749 regulation of cell cycle G2/M phase transition BP
GO:1902751 positive regulation of cell cycle G2/M phase transition BP
GO:1905392 plant organ morphogenesis BP
GO:1905393 plant organ formation BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000030 regulation of response to red or far red light BP
GO:2000082 regulation of L-ascorbic acid biosynthetic process BP