Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt9G01950
View in Genome Browser
Position
chr9:67182202-67183943 (+)
1741bp
Gene Type
gene
Gene Description (Protein Product)
Photosystem I assembly protein Ycf4
Organism
Pinus tabuliformis
Also AS ATCG00520

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtQG39610 Photosystem I reaction center subunit XI
PtQG06050 photosystem I subunit
PtQG20970 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G02510 transcription factor
Pt0G07980 dof zinc finger protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0015979 photosynthesis BP
GO:0016043 cellular component organization BP
GO:0019684 photosynthesis, light reaction BP
GO:0022607 cellular component assembly BP
GO:0034622 protein-containing complex assembly BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048564 photosystem I assembly BP
GO:0051082 unfolded protein binding MF
GO:0065003 protein-containing complex assembly BP
GO:0071840 cellular component organization or biogenesis BP