Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt9G04070
View in Genome Browser
Position
chr9:142506474-142675195 (-)
168721bp
Gene Type
gene
Gene Description (Protein Product)
Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function
Organism
Pinus tabuliformis
Also AS AT2G27970

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pt9G11910 Belongs to the protein kinase superfamily
Pt9G12140 Belongs to the protein kinase superfamily
Pt9G39390 Belongs to the cyclin family
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein
Pt1G66310 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity BP
GO:0000151 ubiquitin ligase complex CC
GO:0000278 mitotic cell cycle BP
GO:0000307 cyclin-dependent protein kinase holoenzyme complex CC
GO:0001932 regulation of protein phosphorylation BP
GO:0001934 positive regulation of protein phosphorylation BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006260 DNA replication BP
GO:0006261 DNA-templated DNA replication BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007049 cell cycle BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0008047 enzyme activator activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010562 positive regulation of phosphorus metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity MF
GO:0019005 SCF ubiquitin ligase complex CC
GO:0019207 kinase regulator activity MF
GO:0019209 kinase activator activity MF
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019887 protein kinase regulator activity MF
GO:0019899 enzyme binding MF
GO:0019900 kinase binding MF
GO:0019901 protein kinase binding MF
GO:0022402 cell cycle process BP
GO:0030234 enzyme regulator activity MF
GO:0030295 protein kinase activator activity MF
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0031399 regulation of protein modification process BP
GO:0031401 positive regulation of protein modification process BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0032147 activation of protein kinase activity BP
GO:0032182 ubiquitin-like protein binding MF
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0032991 protein-containing complex CC
GO:0033674 positive regulation of kinase activity BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0042023 DNA endoreduplication BP
GO:0042325 regulation of phosphorylation BP
GO:0042327 positive regulation of phosphorylation BP
GO:0042393 histone binding MF
GO:0043085 positive regulation of catalytic activity BP
GO:0043130 ubiquitin binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043539 protein serine/threonine kinase activator activity MF
GO:0043549 regulation of kinase activity BP
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0044786 cell cycle DNA replication BP
GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity BP
GO:0045787 positive regulation of cell cycle BP
GO:0045859 regulation of protein kinase activity BP
GO:0045860 positive regulation of protein kinase activity BP
GO:0045893 positive regulation of DNA-templated transcription BP
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0045937 positive regulation of phosphate metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051254 positive regulation of RNA metabolic process BP
GO:0051338 regulation of transferase activity BP
GO:0051347 positive regulation of transferase activity BP
GO:0051726 regulation of cell cycle BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity MF
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0071704 organic substance metabolic process BP
GO:0071900 regulation of protein serine/threonine kinase activity BP
GO:0071902 positive regulation of protein serine/threonine kinase activity BP
GO:0080090 regulation of primary metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0098772 molecular function regulator activity MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1902494 catalytic complex CC
GO:1902554 serine/threonine protein kinase complex CC
GO:1902680 positive regulation of RNA biosynthetic process BP
GO:1902911 protein kinase complex CC
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903508 positive regulation of nucleic acid-templated transcription BP
GO:1904029 regulation of cyclin-dependent protein kinase activity BP
GO:1904031 positive regulation of cyclin-dependent protein kinase activity BP
GO:1990234 transferase complex CC
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP