Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pt9G06860
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Position
chr9:223437149-223440471 (-)
3322bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the malate synthase family
Organism
Pinus tabuliformis
Also AS AT5G03860

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtQG43210 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PtQG43210
PtXG01640 Biotin carboxylase
Regulatory gene
Pt0G02510 transcription factor
Pt0G13110 ethylene-responsive transcription factor
Pt0G13260 ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004474 malate synthase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005777 peroxisome CC
GO:0005975 carbohydrate metabolic process BP
GO:0006081 cellular aldehyde metabolic process BP
GO:0006082 organic acid metabolic process BP
GO:0006097 glyoxylate cycle BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009514 glyoxysome CC
GO:0009987 cellular process BP
GO:0016740 transferase activity MF
GO:0016746 acyltransferase activity MF
GO:0019752 carboxylic acid metabolic process BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0042579 microbody CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046487 glyoxylate metabolic process BP
GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer MF
GO:0071704 organic substance metabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00630 Glyoxylate and dicarboxylate metabolism -
map00620 Pyruvate metabolism -