PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pt9G43990 View in Genome Browser
Position	chr9:1490132154-1490409641 (+) 277487bp
Gene Type	gene
Gene Description (Protein Product)	Cytidylyltransferase-like Syntaxin
Organism	Pinus tabuliformis
Also AS	AT2G18250

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pt9G48450 At2g17340-like PtJG03370 Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form PtJG03370
Regulatory gene	Pt0G00460 Transcription factor Pt0G10980 Transcription factor Pt0G14730 transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000149	SNARE binding	MF
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005886	plasma membrane	CC
GO:0006810	transport	BP
GO:0006887	exocytosis	BP
GO:0006906	vesicle fusion	BP
GO:0006950	response to stress	BP
GO:0006996	organelle organization	BP
GO:0008150	biological_process	BP
GO:0009266	response to temperature stimulus	BP
GO:0009409	response to cold	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009987	cellular process	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016050	vesicle organization	BP
GO:0016192	vesicle-mediated transport	BP
GO:0022406	membrane docking	BP
GO:0031201	SNARE complex	CC
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0032940	secretion by cell	BP
GO:0032991	protein-containing complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046903	secretion	BP
GO:0048278	vesicle docking	BP
GO:0048284	organelle fusion	BP
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051640	organelle localization	BP
GO:0051641	cellular localization	BP
GO:0061024	membrane organization	BP
GO:0061025	membrane fusion	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0090174	organelle membrane fusion	BP
GO:0098796	membrane protein complex	CC
GO:0140056	organelle localization by membrane tethering	BP
GO:0003824	catalytic activity	MF
GO:0004595	pantetheine-phosphate adenylyltransferase activity	MF
GO:0005829	cytosol	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006140	regulation of nucleotide metabolic process	BP
GO:0006163	purine nucleotide metabolic process	BP
GO:0006164	purine nucleotide biosynthetic process	BP
GO:0006629	lipid metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006970	response to osmotic stress	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009108	obsolete coenzyme biosynthetic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009150	purine ribonucleotide metabolic process	BP
GO:0009152	purine ribonucleotide biosynthetic process	BP
GO:0009165	nucleotide biosynthetic process	BP
GO:0009259	ribonucleotide metabolic process	BP
GO:0009260	ribonucleotide biosynthetic process	BP
GO:0009651	response to salt stress	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0010876	lipid localization	BP
GO:0015936	coenzyme A metabolic process	BP
GO:0015937	coenzyme A biosynthetic process	BP
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016779	nucleotidyltransferase activity	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019220	regulation of phosphate metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0019915	lipid storage	BP
GO:0030808	regulation of nucleotide biosynthetic process	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0033036	macromolecule localization	BP
GO:0033865	nucleoside bisphosphate metabolic process	BP
GO:0033866	nucleoside bisphosphate biosynthetic process	BP
GO:0033875	ribonucleoside bisphosphate metabolic process	BP
GO:0034030	ribonucleoside bisphosphate biosynthetic process	BP
GO:0034032	purine nucleoside bisphosphate metabolic process	BP
GO:0034033	purine nucleoside bisphosphate biosynthetic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034654	nucleobase-containing compound biosynthetic process	BP
GO:0040007	growth	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0046390	ribose phosphate biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051174	regulation of phosphorus metabolic process	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051188	obsolete cofactor biosynthetic process	BP
GO:0051193	obsolete regulation of cofactor metabolic process	BP
GO:0051196	obsolete regulation of coenzyme metabolic process	BP
GO:0051235	maintenance of location	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0062012	regulation of small molecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0070566	adenylyltransferase activity	MF
GO:0071704	organic substance metabolic process	BP
GO:0072521	purine-containing compound metabolic process	BP
GO:0072522	purine-containing compound biosynthetic process	BP
GO:0080020	regulation of coenzyme A biosynthetic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:1900371	regulation of purine nucleotide biosynthetic process	BP
GO:1900542	regulation of purine nucleotide metabolic process	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901293	nucleoside phosphate biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map04130	SNARE interactions in vesicular transport	-
map01100	Metabolic pathways	-
map00770	Pantothenate and CoA biosynthesis	-