Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtQG01100
View in Genome Browser
Position
chr12:25464134-25511133 (+)
46999bp
Gene Type
gene
Gene Description (Protein Product)
acyl-CoA-binding domain-containing protein
Organism
Pinus tabuliformis
Also AS AT4G27780AT5G53470

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtQG11810 ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting
PtQG11810
PtXG17000 B-Box-type zinc finger
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein
Pt1G66310 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000062 fatty-acyl-CoA binding MF
GO:0000166 nucleotide binding MF
GO:0001101 response to acid chemical BP
GO:0001666 response to hypoxia BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005543 phospholipid binding MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005777 peroxisome CC
GO:0005778 peroxisomal membrane CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0005886 plasma membrane CC
GO:0006629 lipid metabolic process BP
GO:0006810 transport BP
GO:0006869 lipid transport BP
GO:0006950 response to stress BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008289 lipid binding MF
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009505 plant-type cell wall CC
GO:0009514 glyoxysome CC
GO:0009628 response to abiotic stimulus BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009791 post-embryonic development BP
GO:0010029 regulation of seed germination BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010154 fruit development BP
GO:0010162 seed dormancy process BP
GO:0010288 response to lead ion BP
GO:0010431 seed maturation BP
GO:0010876 lipid localization BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0017076 purine nucleotide binding MF
GO:0021700 developmental maturation BP
GO:0022414 reproductive process BP
GO:0022611 dormancy process BP
GO:0030312 external encapsulating structure CC
GO:0030554 adenyl nucleotide binding MF
GO:0031090 organelle membrane CC
GO:0031903 microbody membrane CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032791 lead ion binding MF
GO:0033036 macromolecule localization BP
GO:0033218 amide binding MF
GO:0033993 response to lipid BP
GO:0036094 small molecule binding MF
GO:0036293 response to decreased oxygen levels BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0042221 response to chemical BP
GO:0042579 microbody CC
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044238 primary metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044438 obsolete microbody part CC
GO:0044439 obsolete peroxisomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0048037 obsolete cofactor binding MF
GO:0048316 seed development BP
GO:0048580 regulation of post-embryonic development BP
GO:0048608 reproductive structure development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050662 obsolete coenzyme binding MF
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0070300 phosphatidic acid binding MF
GO:0070482 response to oxygen levels BP
GO:0071695 anatomical structure maturation BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:0097159 organic cyclic compound binding MF
GO:0097305 response to alcohol BP
GO:0097367 carbohydrate derivative binding MF
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:0098827 endoplasmic reticulum subcompartment CC
GO:1900140 regulation of seedling development BP
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901567 fatty acid derivative binding MF
GO:1901681 sulfur compound binding MF
GO:1901700 response to oxygen-containing compound BP
GO:2000026 regulation of multicellular organismal development BP