Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtQG13530
View in Genome Browser
Position
chr12:424216195-424303930 (-)
87735bp
Gene Type
gene
Gene Description (Protein Product)
Kinetochore protein ndc80
Organism
Pinus tabuliformis
Also AS AT3G54630

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG42530 Hydroxyproline-rich glycoprotein family protein
PtXG42530
PtQG23650 separase
Regulatory gene
Pt0G03060 homeobox-leucine zipper protein
Pt0G09810 homeobox-leucine zipper protein
Pt0G13020 Homeobox-leucine zipper protein ANTHOCYANINLESS

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000070 mitotic sister chromatid segregation BP
GO:0000228 nuclear chromosome CC
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000775 chromosome, centromeric region CC
GO:0000776 kinetochore CC
GO:0000777 kinetochore CC
GO:0000778 kinetochore CC
GO:0000779 condensed chromosome, centromeric region CC
GO:0000780 condensed chromosome, centromeric region CC
GO:0000793 condensed chromosome CC
GO:0000794 condensed nuclear chromosome CC
GO:0000819 sister chromatid segregation BP
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005200 structural constituent of cytoskeleton MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007049 cell cycle BP
GO:0007059 chromosome segregation BP
GO:0007080 mitotic metaphase plate congression BP
GO:0008150 biological_process BP
GO:0008608 attachment of spindle microtubules to kinetochore BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0022402 cell cycle process BP
GO:0031262 Ndc80 complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044464 obsolete cell part CC
GO:0048285 organelle fission BP
GO:0050000 chromosome localization BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051276 chromosome organization BP
GO:0051303 establishment of chromosome localization BP
GO:0051310 metaphase plate congression BP
GO:0051315 attachment of mitotic spindle microtubules to kinetochore BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051656 establishment of organelle localization BP
GO:0070013 intracellular organelle lumen CC
GO:0071840 cellular component organization or biogenesis BP
GO:0098687 chromosomal region CC
GO:0098813 nuclear chromosome segregation BP
GO:0140014 mitotic nuclear division BP
GO:1903047 mitotic cell cycle process BP