Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtQG15470
View in Genome Browser
Position
chr12:488117040-488210532 (-)
93492bp
Gene Type
gene
Gene Description (Protein Product)
sodium metabolite cotransporter
Organism
Pinus tabuliformis
Also AS AT4G12030

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG06690 NHL domain-containing protein
Regulatory gene
Pt0G33700 In Between Ring fingers
Pt0G33720 RWP-RK domain
Pt0G35470 RWP-RK domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000096 sulfur amino acid metabolic process BP
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005342 organic acid transmembrane transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006820 monoatomic anion transport BP
GO:0006855 xenobiotic transmembrane transport BP
GO:0006950 response to stress BP
GO:0008028 monocarboxylic acid transmembrane transporter activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008509 monoatomic anion transmembrane transporter activity MF
GO:0008514 organic anion transmembrane transporter activity MF
GO:0009058 biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009611 response to wounding BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009753 response to jasmonic acid BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015238 xenobiotic transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015665 alcohol transmembrane transporter activity MF
GO:0015711 organic anion transport BP
GO:0015718 monocarboxylic acid transport BP
GO:0015849 organic acid transport BP
GO:0015850 organic hydroxy compound transport BP
GO:0015893 xenobiotic transport BP
GO:0016143 S-glycoside metabolic process BP
GO:0016144 S-glycoside biosynthetic process BP
GO:0019748 secondary metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0019757 glycosinolate metabolic process BP
GO:0019758 glycosinolate biosynthetic process BP
GO:0019760 glucosinolate metabolic process BP
GO:0019761 glucosinolate biosynthetic process BP
GO:0022857 transmembrane transporter activity MF
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0033321 homomethionine metabolic process BP
GO:0033506 glucosinolate biosynthetic process from homomethionine BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0043879 glycolate transmembrane transporter activity MF
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044272 sulfur compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044550 secondary metabolite biosynthetic process BP
GO:0046942 carboxylic acid transport BP
GO:0046943 carboxylic acid transmembrane transporter activity MF
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0097339 glycolate transmembrane transport BP
GO:0098656 monoatomic anion transmembrane transport BP
GO:1900866 glycolate transport BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901618 organic hydroxy compound transmembrane transporter activity MF
GO:1901657 glycosyl compound metabolic process BP
GO:1901659 glycosyl compound biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1903825 organic acid transmembrane transport BP
GO:1905039 carboxylic acid transmembrane transport BP