Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtQG15580
View in Genome Browser
Position
chr12:494637330-494658120 (+)
20790bp
Gene Type
gene
Gene Description (Protein Product)
SPX domain
SPX domain-containing protein
Organism
Pinus tabuliformis
Also AS AT5G15330

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtQG17460 E3 ubiquitin-protein ligase BRE1-like
PtQG39350 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
PtQG40930 Purple acid phosphatase
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein
Pt0G30270 G patch domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009267 cellular response to starvation BP
GO:0009409 response to cold BP
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0012505 endomembrane system CC
GO:0016036 cellular response to phosphate starvation BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0033554 cellular response to stress BP
GO:0042594 response to starvation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0070417 cellular response to cold BP
GO:0071496 cellular response to external stimulus BP
GO:0005634 nucleus CC
GO:0010646 regulation of cell communication BP
GO:0010647 positive regulation of cell communication BP
GO:0032101 regulation of response to external stimulus BP
GO:0032103 positive regulation of response to external stimulus BP
GO:0032104 regulation of response to extracellular stimulus BP
GO:0032106 positive regulation of response to extracellular stimulus BP
GO:0032107 regulation of response to nutrient levels BP
GO:0032109 positive regulation of response to nutrient levels BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0065007 biological regulation BP
GO:0080040 positive regulation of cellular response to phosphate starvation BP
GO:0080134 regulation of response to stress BP
GO:0080135 regulation of cellular response to stress BP