PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	PtQG25540 View in Genome Browser
Position	chr12:822158549-822159290 (-) 741bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6 SMT family
Organism	Pinus tabuliformis
Also AS	AT1G20330

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	PtXG10030 Belongs to the 14-3-3 family PtXG24690 Belongs to the 14-3-3 family PtQG31230 ubiquitin receptor
Regulatory gene	Pt0G20740 (No apical meristem) protein Pt0G30790 Myb family transcription factor Pt0G31360 structural constituent of ribosome

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003002	regionalization	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0003838	sterol 24-C-methyltransferase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005794	Golgi apparatus	CC
GO:0006275	regulation of DNA replication	BP
GO:0006629	lipid metabolic process	BP
GO:0006694	steroid biosynthetic process	BP
GO:0007275	multicellular organism development	BP
GO:0007389	pattern specification process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008156	negative regulation of DNA replication	BP
GO:0008168	methyltransferase activity	MF
GO:0008169	C-methyltransferase activity	MF
GO:0008202	steroid metabolic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009825	multidimensional cell growth	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009890	negative regulation of biosynthetic process	BP
GO:0009892	negative regulation of metabolic process	BP
GO:0009987	cellular process	BP
GO:0010051	xylem and phloem pattern formation	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0010558	negative regulation of macromolecule biosynthetic process	BP
GO:0010564	regulation of cell cycle process	BP
GO:0010605	negative regulation of macromolecule metabolic process	BP
GO:0010948	negative regulation of cell cycle process	BP
GO:0012505	endomembrane system	CC
GO:0016049	cell growth	BP
GO:0016125	sterol metabolic process	BP
GO:0016126	sterol biosynthetic process	BP
GO:0016740	transferase activity	MF
GO:0016741	transferase activity, transferring one-carbon groups	MF
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031324	negative regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0031327	negative regulation of cellular biosynthetic process	BP
GO:0032259	methylation	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032875	regulation of DNA endoreduplication	BP
GO:0032876	negative regulation of DNA endoreduplication	BP
GO:0040007	growth	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044238	primary metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045786	negative regulation of cell cycle	BP
GO:0045934	negative regulation of nucleobase-containing compound metabolic process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051052	regulation of DNA metabolic process	BP
GO:0051053	negative regulation of DNA metabolic process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051172	negative regulation of nitrogen compound metabolic process	BP
GO:0051726	regulation of cell cycle	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090329	regulation of DNA-templated DNA replication	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901617	organic hydroxy compound biosynthetic process	BP
GO:2000104	negative regulation of DNA-templated DNA replication	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2000113	negative regulation of cellular macromolecule biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00100	Steroid biosynthesis	-