Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtQG31960
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Position
chr12:1066509464-1066551469 (-)
42005bp
Gene Type
gene
Gene Description (Protein Product)
"atfip1 v
Organism
Pinus tabuliformis
Also AS AT5G58040

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG40310 Cleavage and polyadenylation specificity factor subunit
PtXG40710 cleavage and polyadenylation specificity factor subunit
PtXG34660 Zinc finger CCCH domain-containing protein
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein
Pt1G66310 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0042802 identical protein binding MF
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF