PPGR - Gene Detail

Basic Information

Gene ID	PtQG40100 View in Genome Browser
Position	chr12:1298739808-1298748254 (-) 8446bp
Gene Type	gene
Gene Description (Protein Product)	Galactosyl transferase GMA12 MNN10 family protein glycosyltransferase 7
Organism	Pinus tabuliformis
Also AS	AT4G37690AT4G38310

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

PtXG22250 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

PtXG22250 Ubiquitin family

PtXG07460 Ubiquitin family

Regulatory gene

Pt0G01630 dof zinc finger protein

Pt0G07980 dof zinc finger protein

Pt0G30270 G patch domain-containing protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000271	polysaccharide biosynthetic process	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005768	endosome	CC
GO:0005794	Golgi apparatus	CC
GO:0005802	trans-Golgi network	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005976	polysaccharide metabolic process	BP
GO:0006080	substituted mannan metabolic process	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008378	galactosyltransferase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009791	post-embryonic development	BP
GO:0009987	cellular process	BP
GO:0010154	fruit development	BP
GO:0010191	mucilage metabolic process	BP
GO:0010192	mucilage biosynthetic process	BP
GO:0010214	seed coat development	BP
GO:0010392	galactoglucomannan metabolic process	BP
GO:0012505	endomembrane system	CC
GO:0016051	carbohydrate biosynthetic process	BP
GO:0016740	transferase activity	MF
GO:0016757	glycosyltransferase activity	MF
GO:0016758	hexosyltransferase activity	MF
GO:0022414	reproductive process	BP
GO:0031410	cytoplasmic vesicle	CC
GO:0031982	vesicle	CC
GO:0031984	organelle subcompartment	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044431	obsolete Golgi apparatus part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0048316	seed development	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0051069	galactomannan metabolic process	BP
GO:0051070	galactomannan biosynthetic process	BP
GO:0061458	reproductive system development	BP
GO:0071704	organic substance metabolic process	BP
GO:0097708	intracellular vesicle	CC
GO:0098791	Golgi apparatus subcompartment	CC
GO:1901576	organic substance biosynthetic process	BP