Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG00540
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Position
chr10:10356540-10686273 (-)
329733bp
Gene Type
gene
Gene Description (Protein Product)
Histone-lysine n-methyltransferase
Organism
Pinus tabuliformis
Also AS AT4G30860

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG16440 DNA (cytosine-5)-methyltransferase
PtXG16440 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PtXG27460 OBERON-like protein
Regulatory gene
Pt0G20740 (No apical meristem) protein
Pt0G31360 structural constituent of ribosome
Pt0G33890 NAC domain containing protein 28

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000785 chromatin CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00310 Lysine degradation -