Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG01410
View in Genome Browser
Position
chr10:27423111-27423848 (+)
737bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the GRAS family
Organism
Pinus tabuliformis
Also AS AT1G14920

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG47210 gibberellin receptor
PtXG26050 TB2/DP1, HVA22 family
PtXG37790 SUMO-activating enzyme subunit
Regulatory gene
Pt0G00460 Transcription factor
Pt0G10980 Transcription factor
Pt0G14730 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000910 cytokinesis BP
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006808 regulation of nitrogen utilization BP
GO:0006810 transport BP
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006972 hyperosmotic response BP
GO:0007049 cell cycle BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009639 response to red or far red light BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009739 response to gibberellin BP
GO:0009740 gibberellic acid mediated signaling pathway BP
GO:0009751 response to salicylic acid BP
GO:0009753 response to jasmonic acid BP
GO:0009755 hormone-mediated signaling pathway BP
GO:0009863 salicylic acid mediated signaling pathway BP
GO:0009867 jasmonic acid mediated signaling pathway BP
GO:0009889 regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009937 regulation of gibberellic acid mediated signaling pathway BP
GO:0009938 negative regulation of gibberellic acid mediated signaling pathway BP
GO:0009966 regulation of signal transduction BP
GO:0009968 negative regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010029 regulation of seed germination BP
GO:0010033 response to organic substance BP
GO:0010187 negative regulation of seed germination BP
GO:0010218 response to far red light BP
GO:0010232 vascular transport BP
GO:0010233 phloem transport BP
GO:0010453 regulation of cell fate commitment BP
GO:0010454 negative regulation of cell fate commitment BP
GO:0010468 regulation of gene expression BP
GO:0010476 gibberellin mediated signaling pathway BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0010629 negative regulation of gene expression BP
GO:0010646 regulation of cell communication BP
GO:0010648 negative regulation of cell communication BP
GO:0014070 response to organic cyclic compound BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0023051 regulation of signaling BP
GO:0023052 signaling BP
GO:0023057 negative regulation of signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032870 cellular response to hormone stimulus BP
GO:0033206 meiotic cytokinesis BP
GO:0033993 response to lipid BP
GO:0035690 cellular response to xenobiotic stimulus BP
GO:0040008 regulation of growth BP
GO:0042176 regulation of protein catabolic process BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042538 hyperosmotic salinity response BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044212 transcription cis-regulatory region binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045595 regulation of cell differentiation BP
GO:0045596 negative regulation of cell differentiation BP
GO:0045926 negative regulation of growth BP
GO:0046677 response to antibiotic BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048581 negative regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048638 regulation of developmental growth BP
GO:0048640 negative regulation of developmental growth BP
GO:0048831 regulation of shoot system development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051093 negative regulation of developmental process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051301 cell division BP
GO:0051321 meiotic cell cycle BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061640 cytoskeleton-dependent cytokinesis BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071229 cellular response to acid chemical BP
GO:0071236 cellular response to antibiotic BP
GO:0071310 cellular response to organic substance BP
GO:0071370 cellular response to gibberellin stimulus BP
GO:0071395 cellular response to jasmonic acid stimulus BP
GO:0071396 cellular response to lipid BP
GO:0071407 cellular response to organic cyclic compound BP
GO:0071446 cellular response to salicylic acid stimulus BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0080050 regulation of seed development BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0097305 response to alcohol BP
GO:0140110 transcription regulator activity MF
GO:1900032 regulation of trichome patterning BP
GO:1900033 negative regulation of trichome patterning BP
GO:1900140 regulation of seedling development BP
GO:1901363 heterocyclic compound binding MF
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1903046 meiotic cell cycle process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905613 regulation of developmental vegetative growth BP
GO:1905614 negative regulation of developmental vegetative growth BP
GO:1905622 negative regulation of leaf development BP
GO:2000024 regulation of leaf development BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000033 regulation of seed dormancy process BP
GO:2000034 regulation of seed maturation BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000241 regulation of reproductive process BP
GO:2000377 regulation of reactive oxygen species metabolic process BP
GO:2001141 regulation of RNA biosynthetic process BP
KEGG Term Name Description
map04075 Plant hormone signal transduction -