Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG11490
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Position
chr10:343249202-343252501 (+)
3299bp
Gene Type
gene
Gene Description (Protein Product)
Topless-related protein
Organism
Pinus tabuliformis
Also AS AT1G15750

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG35920 Belongs to the histone deacetylase family. HD Type 1 subfamily
PtXG13150 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PtXG13150
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G03060 homeobox-leucine zipper protein
Pt0G07980 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009888 tissue development BP
GO:0009933 meristem structural organization BP
GO:0010014 meristem initiation BP
GO:0010016 shoot system morphogenesis BP
GO:0010072 primary shoot apical meristem specification BP
GO:0010154 fruit development BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0048316 seed development BP
GO:0048367 shoot system development BP
GO:0048507 meristem development BP
GO:0048508 embryonic meristem development BP
GO:0048532 anatomical structure arrangement BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0061458 reproductive system development BP
GO:0090421 embryonic meristem initiation BP