Basic Information
Gene ID
Position
chr10:513818480-514200123 (+)
381643bp
Gene Type
gene
Gene Description (Protein Product)
prolyl 4-hydroxylase
Organism
Also AS AT5G18900

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG52680 Belongs to the UDP-glycosyltransferase family
PtXG45330 serine threonine-protein kinase
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G07980 dof zinc finger protein
Pt1G66310 Dof domain, zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004656 procollagen-proline 4-dioxygenase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005783 endoplasmic reticulum CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0006082 organic acid metabolic process BP
GO:0006464 protein modification process BP
GO:0006520 amino acid metabolic process BP
GO:0006575 cellular modified amino acid metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010053 root epidermal cell differentiation BP
GO:0010054 trichoblast differentiation BP
GO:0012505 endomembrane system CC
GO:0016491 oxidoreductase activity MF
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen MF
GO:0016706 2-oxoglutarate-dependent dioxygenase activity MF
GO:0018126 protein hydroxylation BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018208 peptidyl-proline modification BP
GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline BP
GO:0019471 4-hydroxyproline metabolic process BP
GO:0019511 peptidyl-proline hydroxylation BP
GO:0019538 protein metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0019798 procollagen-proline dioxygenase activity MF
GO:0021700 developmental maturation BP
GO:0022622 root system development BP
GO:0030154 cell differentiation BP
GO:0031410 cytoplasmic vesicle CC
GO:0031543 peptidyl-proline dioxygenase activity MF
GO:0031545 peptidyl-proline 4-dioxygenase activity MF
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048364 root development BP
GO:0048468 cell development BP
GO:0048469 cell maturation BP
GO:0048731 system development BP
GO:0048764 trichoblast maturation BP
GO:0048765 root hair cell differentiation BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051213 dioxygenase activity MF
GO:0055114 obsolete oxidation-reduction process BP
GO:0071695 anatomical structure maturation BP
GO:0071704 organic substance metabolic process BP
GO:0080147 root hair cell development BP
GO:0090558 plant epidermis development BP
GO:0090627 plant epidermal cell differentiation BP
GO:0097708 intracellular vesicle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0099402 plant organ development BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1905392 plant organ morphogenesis BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00330 Arginine and proline metabolism -