Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG21540
View in Genome Browser
Position
chr10:641355465-641376142 (+)
20677bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the pirin family
Organism
Pinus tabuliformis
Also AS AT3G59220

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG51640 Nuclear transcription factor Y subunit
PtXG55100 prolyl 4-hydroxylase
PtXG55100 Prolyl 4-hydroxylase alpha subunit homologues.
Regulatory gene
Pt0G00460 Transcription factor
Pt0G02510 transcription factor
Pt0G10980 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0004857 enzyme inhibitor activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009628 response to abiotic stimulus BP
GO:0009637 response to blue light BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009738 abscisic acid-activated signaling pathway BP
GO:0009755 hormone-mediated signaling pathway BP
GO:0009785 blue light signaling pathway BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010466 negative regulation of peptidase activity BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0016020 membrane CC
GO:0019222 regulation of metabolic process BP
GO:0023052 signaling BP
GO:0030162 regulation of proteolysis BP
GO:0030234 enzyme regulator activity MF
GO:0030414 peptidase inhibitor activity MF
GO:0030522 intracellular receptor signaling pathway BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0032268 regulation of protein metabolic process BP
GO:0032269 negative regulation of protein metabolic process BP
GO:0032870 cellular response to hormone stimulus BP
GO:0033993 response to lipid BP
GO:0042221 response to chemical BP
GO:0042742 defense response to bacterium BP
GO:0043086 negative regulation of catalytic activity BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044092 negative regulation of molecular function BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045861 negative regulation of proteolysis BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051248 negative regulation of protein metabolic process BP
GO:0051336 regulation of hydrolase activity BP
GO:0051346 negative regulation of hydrolase activity BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0052547 regulation of peptidase activity BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061134 peptidase regulator activity MF
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071215 cellular response to abscisic acid stimulus BP
GO:0071229 cellular response to acid chemical BP
GO:0071310 cellular response to organic substance BP
GO:0071396 cellular response to lipid BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071483 cellular response to blue light BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0071944 cell periphery CC
GO:0080090 regulation of primary metabolic process BP
GO:0097305 response to alcohol BP
GO:0097306 cellular response to alcohol BP
GO:0098542 defense response to other organism BP
GO:0098772 molecular function regulator activity MF
GO:0104004 cellular response to environmental stimulus BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP