Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG25870
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Position
chr10:806657828-806826905 (+)
169077bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the short-chain dehydrogenases reductases (SDR) family
Organism
Pinus tabuliformis
Also AS AT4G27760

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG37190 magnesium protoporphyrin IX methyltransferase
PtXG37140 magnesium protoporphyrin IX methyltransferase
PtXG54680 E3 ubiquitin ligase BIG
Regulatory gene
Pt0G00460 Transcription factor
Pt0G01110 Myb-like DNA-binding domain
Pt0G06240 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001523 retinoid metabolic process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004033 aldo-keto reductase (NADP) activity MF
GO:0004745 NAD-retinol dehydrogenase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0006066 alcohol metabolic process BP
GO:0006081 cellular aldehyde metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0008106 alcohol dehydrogenase (NADP+) activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010073 meristem maintenance BP
GO:0010817 regulation of hormone levels BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016101 diterpenoid metabolic process BP
GO:0016491 oxidoreductase activity MF
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors MF
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor MF
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034308 primary alcohol metabolic process BP
GO:0034754 hormone metabolic process BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0042445 hormone metabolic process BP
GO:0042572 retinol metabolic process BP
GO:0042574 retinal metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048507 meristem development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0052650 NADP-retinol dehydrogenase activity MF
GO:0055114 obsolete oxidation-reduction process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:0098827 endoplasmic reticulum subcompartment CC
GO:1901615 organic hydroxy compound metabolic process BP
GO:2000024 regulation of leaf development BP
GO:2000026 regulation of multicellular organismal development BP