Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG29830
View in Genome Browser
Position
chr10:949176333-949292367 (+)
116034bp
Gene Type
gene
Gene Description (Protein Product)
xanthophyll metabolic process
Organism
Pinus tabuliformis
Also AS AT1G67080

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG44860 -
PtXG44860
PtXG44840 MADS-box protein
Regulatory gene
Pt0G01630 dof zinc finger protein
Pt0G02880 -
Pt0G03060 homeobox-leucine zipper protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006066 alcohol metabolic process BP
GO:0006082 organic acid metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006714 sesquiterpenoid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008299 isoprenoid biosynthetic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009687 abscisic acid metabolic process BP
GO:0009688 abscisic acid biosynthetic process BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0016053 organic acid biosynthetic process BP
GO:0016106 sesquiterpenoid biosynthetic process BP
GO:0016108 tetraterpenoid metabolic process BP
GO:0016109 tetraterpenoid biosynthetic process BP
GO:0016114 terpenoid biosynthetic process BP
GO:0016116 carotenoid metabolic process BP
GO:0016117 carotenoid biosynthetic process BP
GO:0016122 xanthophyll metabolic process BP
GO:0016123 xanthophyll biosynthetic process BP
GO:0019222 regulation of metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032787 monocarboxylic acid metabolic process BP
GO:0032928 regulation of superoxide anion generation BP
GO:0042440 pigment metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043288 apocarotenoid metabolic process BP
GO:0043289 apocarotenoid biosynthetic process BP
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046148 pigment biosynthetic process BP
GO:0046165 alcohol biosynthetic process BP
GO:0046394 carboxylic acid biosynthetic process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0072330 monocarboxylic acid biosynthetic process BP
GO:0090322 regulation of superoxide metabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901617 organic hydroxy compound biosynthetic process BP
GO:1902644 tertiary alcohol metabolic process BP
GO:1902645 tertiary alcohol biosynthetic process BP
GO:2000377 regulation of reactive oxygen species metabolic process BP