Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PtXG35700
View in Genome Browser
Position
chr10:1121965992-1121967043 (+)
1051bp
Gene Type
gene
Gene Description (Protein Product)
translation initiation factor eIF-2B subunit epsilon
Organism
Pinus tabuliformis
Also AS AT2G34970

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PtXG49760 Belongs to the AAA ATPase family
PtXG41660 Belongs to the class-I aminoacyl-tRNA synthetase family
Regulatory gene
Pt0G02510 transcription factor
Pt0G02880 -
Pt0G13110 ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002181 cytoplasmic translation BP
GO:0002183 cytoplasmic translational initiation BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003743 translation initiation factor activity MF
GO:0005085 guanyl-nucleotide exchange factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005851 eukaryotic translation initiation factor 2B complex CC
GO:0006412 translation BP
GO:0006413 translational initiation BP
GO:0006518 peptide metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008135 translation factor activity, RNA binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0019538 protein metabolic process BP
GO:0019899 enzyme binding MF
GO:0032991 protein-containing complex CC
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0043043 peptide biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0051020 GTPase binding MF
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0071704 organic substance metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0098772 molecular function regulator activity MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP