Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_00006.g
View in Genome Browser
Position
scaffold156641:143611-144331 (+)
720bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the universal ribosomal protein uS8 family
Organism
Pinus taeda
Also AS AT5G59850

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_36748.g Belongs to the universal ribosomal protein uS12 family
PITA_31187.g Belongs to the universal ribosomal protein uS11 family
PITA_18851.g Belongs to the universal ribosomal protein uL3 family
Regulatory gene
PITA_00088.g NAC domain-containing protein
PITA_00097.g NAC domain containing protein 28
PITA_00262.g NAC transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003735 structural constituent of ribosome MF
GO:0005198 structural molecule activity MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005829 cytosol CC
GO:0005840 ribosome CC
GO:0005844 polysome CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0015935 small ribosomal subunit CC
GO:0016020 membrane CC
GO:0022626 cytosolic ribosome CC
GO:0022627 cytosolic small ribosomal subunit CC
GO:0030054 cell junction CC
GO:0030312 external encapsulating structure CC
GO:0031090 organelle membrane CC
GO:0032991 protein-containing complex CC
GO:0042788 polysomal ribosome CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044391 ribosomal subunit CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0055044 symplast CC
GO:0071944 cell periphery CC
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:1990904 ribonucleoprotein complex CC
KEGG Term Name Description
map03010 Ribosome -