Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_00228.g
View in Genome Browser
Position
C4097255:1526-3572 (-)
2046bp
Gene Type
gene
Gene Description (Protein Product)
ubiquitin binding
Organism
Pinus taeda
Also AS AT4G24690

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
PITA_00047.g homeobox-leucine zipper protein
PITA_00791.g Two-component response regulator-like
PITA_01191.g Homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005770 late endosome CC
GO:0005773 vacuole CC
GO:0005829 cytosol CC
GO:0006914 autophagy BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0016043 cellular component organization BP
GO:0016236 macroautophagy BP
GO:0022607 cellular component assembly BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032182 ubiquitin-like protein binding MF
GO:0034622 protein-containing complex assembly BP
GO:0043130 ubiquitin binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0051258 protein polymerization BP
GO:0051259 protein complex oligomerization BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0065003 protein-containing complex assembly BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097708 intracellular vesicle CC