Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_01627.g
View in Genome Browser
Position
scaffold214868:6106-7526 (+)
1420bp
Gene Type
gene
Gene Description (Protein Product)
cytochrome c oxidase copper
Organism
Pinus taeda
Also AS AT3G15352

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_51219.g Cytochrome oxidase c subunit VIb
PITA_04674.g protoheme IX farnesyltransferase
PITA_47571.g Cytochrome c oxidase subunit
Regulatory gene
PITA_00088.g NAC domain-containing protein
PITA_00097.g NAC domain containing protein 28
PITA_00262.g NAC transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000041 transition metal ion transport BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005758 mitochondrial intermembrane space CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006825 copper ion transport BP
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0008150 biological_process BP
GO:0008535 respiratory chain complex IV assembly BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016530 metallochaperone activity MF
GO:0016531 copper chaperone activity MF
GO:0017004 cytochrome complex assembly BP
GO:0022607 cellular component assembly BP
GO:0030001 metal ion transport BP
GO:0031967 organelle envelope CC
GO:0031970 organelle envelope lumen CC
GO:0031974 membrane-enclosed lumen CC
GO:0031975 envelope CC
GO:0033108 mitochondrial respiratory chain complex assembly BP
GO:0033617 mitochondrial cytochrome c oxidase assembly BP
GO:0034622 protein-containing complex assembly BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0065003 protein-containing complex assembly BP
GO:0070013 intracellular organelle lumen CC
GO:0071840 cellular component organization or biogenesis BP
GO:0140104 molecular carrier activity MF
KEGG Term Name Description
map01100 Metabolic pathways -
map00190 Oxidative phosphorylation -