Basic Information
Gene ID
Position
scaffold79410:188613-193278 (+)
4665bp
Gene Type
gene
Gene Description (Protein Product)
calcium ion binding
Organism
Also AS AT2G27030

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_36479.g serine threonine-protein phosphatase
PITA_21428.g E3 ubiquitin-protein ligase
PITA_35556.g atcp1,cp1
Regulatory gene
PITA_00548.g Mini zinc finger protein
PITA_01614.g Protein PHR1-LIKE 1-like isoform
PITA_01757.g Aspartate glutamate uridylate kinase family protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005509 calcium ion binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006109 regulation of carbohydrate metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0030656 regulation of vitamin metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0033554 cellular response to stress BP
GO:0034599 cellular response to oxidative stress BP
GO:0042221 response to chemical BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043255 regulation of carbohydrate biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051193 obsolete regulation of cofactor metabolic process BP
GO:0051196 obsolete regulation of coenzyme metabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0080090 regulation of primary metabolic process BP
GO:2000082 regulation of L-ascorbic acid biosynthetic process BP
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.
map04070 Phosphatidylinositol signaling system -