Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_15862.g
View in Genome Browser
Position
scaffold11137:92257-93231 (+)
974bp
Gene Type
gene
Gene Description (Protein Product)
IRX15-LIKE-like
Organism
Pinus taeda
Also AS AT5G67210

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_41207.g ER membrane protein complex subunit
PITA_18351.g -
PITA_29580.g Protein cornichon homolog
Regulatory gene
PITA_01408.g Zinc finger protein
PITA_02918.g Zinc finger protein
PITA_03418.g ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000271 polysaccharide biosynthetic process BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009832 plant-type cell wall biogenesis BP
GO:0009834 plant-type secondary cell wall biogenesis BP
GO:0009987 cellular process BP
GO:0010383 cell wall polysaccharide metabolic process BP
GO:0010410 hemicellulose metabolic process BP
GO:0012505 endomembrane system CC
GO:0016051 carbohydrate biosynthetic process BP
GO:0033692 cellular polysaccharide biosynthetic process BP
GO:0034637 cellular carbohydrate biosynthetic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0042546 cell wall biogenesis BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044036 cell wall macromolecule metabolic process BP
GO:0044038 cell wall macromolecule biosynthetic process BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044264 cellular polysaccharide metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045491 xylan metabolic process BP
GO:0045492 xylan biosynthetic process BP
GO:0070589 cellular component macromolecule biosynthetic process BP
GO:0070592 cell wall polysaccharide biosynthetic process BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071669 plant-type cell wall organization or biogenesis BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:1901576 organic substance biosynthetic process BP